Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NrlP54846 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.37■□□□□ 0.69
NrlP54846 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NrlP54846 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NrlP54846 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NrlP54846 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NrlP54846 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NrlP54846 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
NrlP54846 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
NrlP54846 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
NrlP54846 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.37■□□□□ 0.69
NrlP54846 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NrlP54846 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NrlP54846 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NrlP54846 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.37■□□□□ 0.69
NrlP54846 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.37■□□□□ 0.69
NrlP54846 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NrlP54846 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NrlP54846 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NrlP54846 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NrlP54846 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
NrlP54846 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.36■□□□□ 0.69
NrlP54846 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NrlP54846 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NrlP54846 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NrlP54846 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.36■□□□□ 0.69
NrlP54846 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NrlP54846 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.36■□□□□ 0.69
NrlP54846 Gm9987-201ENSMUST00000069768 567 ntBASIC19.36■□□□□ 0.69
NrlP54846 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NrlP54846 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NrlP54846 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NrlP54846 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NrlP54846 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NrlP54846 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NrlP54846 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
NrlP54846 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
NrlP54846 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NrlP54846 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.35■□□□□ 0.69
NrlP54846 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NrlP54846 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NrlP54846 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NrlP54846 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
NrlP54846 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NrlP54846 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NrlP54846 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
NrlP54846 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NrlP54846 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NrlP54846 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NrlP54846 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NrlP54846 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NrlP54846 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NrlP54846 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NrlP54846 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NrlP54846 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NrlP54846 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NrlP54846 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NrlP54846 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NrlP54846 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
NrlP54846 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.34■□□□□ 0.69
NrlP54846 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.34■□□□□ 0.69
NrlP54846 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NrlP54846 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.34■□□□□ 0.69
NrlP54846 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NrlP54846 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NrlP54846 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NrlP54846 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NrlP54846 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NrlP54846 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NrlP54846 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NrlP54846 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NrlP54846 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.33■□□□□ 0.68
NrlP54846 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.33■□□□□ 0.68
NrlP54846 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NrlP54846 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NrlP54846 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
NrlP54846 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
NrlP54846 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
NrlP54846 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NrlP54846 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NrlP54846 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
NrlP54846 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NrlP54846 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.33■□□□□ 0.68
NrlP54846 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NrlP54846 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NrlP54846 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NrlP54846 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NrlP54846 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NrlP54846 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
NrlP54846 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.32■□□□□ 0.68
NrlP54846 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NrlP54846 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NrlP54846 Mtag2-201ENSMUST00000058665 714 ntBASIC19.32■□□□□ 0.68
NrlP54846 Gm5417-201ENSMUST00000079706 384 ntBASIC19.32■□□□□ 0.68
NrlP54846 Zfp783-201ENSMUST00000095946 670 ntBASIC19.32■□□□□ 0.68
NrlP54846 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.32■□□□□ 0.68
NrlP54846 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NrlP54846 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NrlP54846 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NrlP54846 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms