Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nub1P54729 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nub1P54729 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nub1P54729 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Nub1P54729 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nub1P54729 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nub1P54729 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nub1P54729 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.56■□□□□ 0.72
Nub1P54729 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nub1P54729 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
Nub1P54729 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nub1P54729 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Nub1P54729 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Nub1P54729 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.55■□□□□ 0.72
Nub1P54729 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Nub1P54729 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nub1P54729 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nub1P54729 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Nub1P54729 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
Nub1P54729 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nub1P54729 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Nub1P54729 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nub1P54729 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nub1P54729 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nub1P54729 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Nub1P54729 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Nub1P54729 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nub1P54729 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Nub1P54729 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Nub1P54729 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nub1P54729 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Nub1P54729 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.54■□□□□ 0.72
Nub1P54729 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nub1P54729 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nub1P54729 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Nub1P54729 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nub1P54729 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
Nub1P54729 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nub1P54729 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nub1P54729 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Nub1P54729 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.53■□□□□ 0.72
Nub1P54729 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.53■□□□□ 0.72
Nub1P54729 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.53■□□□□ 0.72
Nub1P54729 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Nub1P54729 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Nub1P54729 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nub1P54729 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nub1P54729 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nub1P54729 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nub1P54729 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Nub1P54729 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.53■□□□□ 0.72
Nub1P54729 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nub1P54729 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nub1P54729 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Nub1P54729 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Nub1P54729 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.52■□□□□ 0.72
Nub1P54729 Gm22325-201ENSMUST00000158904 308 ntBASIC19.52■□□□□ 0.72
Nub1P54729 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.52■□□□□ 0.72
Nub1P54729 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nub1P54729 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Nub1P54729 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Nub1P54729 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Nub1P54729 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nub1P54729 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nub1P54729 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Nub1P54729 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nub1P54729 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nub1P54729 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nub1P54729 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nub1P54729 Gm5408-201ENSMUST00000197998 747 ntBASIC19.51■□□□□ 0.71
Nub1P54729 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Nub1P54729 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nub1P54729 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.51■□□□□ 0.71
Nub1P54729 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nub1P54729 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nub1P54729 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nub1P54729 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nub1P54729 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Nub1P54729 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nub1P54729 Rab3c-203ENSMUST00000224180 967 ntBASIC19.5■□□□□ 0.71
Nub1P54729 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nub1P54729 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nub1P54729 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.5■□□□□ 0.71
Nub1P54729 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nub1P54729 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Nub1P54729 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nub1P54729 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nub1P54729 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
Nub1P54729 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nub1P54729 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
Nub1P54729 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nub1P54729 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Nub1P54729 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.49■□□□□ 0.71
Nub1P54729 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.49■□□□□ 0.71
Nub1P54729 Gm4968-201ENSMUST00000071458 858 ntBASIC19.49■□□□□ 0.71
Nub1P54729 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
Nub1P54729 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nub1P54729 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nub1P54729 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.49■□□□□ 0.71
Nub1P54729 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms