Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Sox18P43680 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Sox18P43680 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox18P43680 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox18P43680 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Sox18P43680 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.41■□□□□ 0.38
Sox18P43680 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox18P43680 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox18P43680 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sox18P43680 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sox18P43680 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sox18P43680 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sox18P43680 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.4■□□□□ 0.38
Sox18P43680 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sox18P43680 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sox18P43680 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sox18P43680 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sox18P43680 Gm12382-201ENSMUST00000122005 922 ntBASIC17.4■□□□□ 0.38
Sox18P43680 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.4■□□□□ 0.38
Sox18P43680 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sox18P43680 Gm10138-203ENSMUST00000206952 366 ntBASIC17.4■□□□□ 0.38
Sox18P43680 Mtag2-201ENSMUST00000058665 714 ntBASIC17.4■□□□□ 0.38
Sox18P43680 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sox18P43680 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Sox18P43680 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Sox18P43680 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Sox18P43680 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sox18P43680 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox18P43680 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.39■□□□□ 0.37
Sox18P43680 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sox18P43680 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox18P43680 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox18P43680 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
Sox18P43680 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox18P43680 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sox18P43680 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sox18P43680 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sox18P43680 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox18P43680 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Sox18P43680 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox18P43680 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox18P43680 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox18P43680 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sox18P43680 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sox18P43680 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.38■□□□□ 0.37
Sox18P43680 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.38■□□□□ 0.37
Sox18P43680 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC17.38■□□□□ 0.37
Sox18P43680 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sox18P43680 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox18P43680 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Sox18P43680 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Sox18P43680 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox18P43680 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sox18P43680 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox18P43680 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox18P43680 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sox18P43680 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Sox18P43680 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sox18P43680 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sox18P43680 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sox18P43680 Gm42545-201ENSMUST00000202755 922 ntBASIC17.37■□□□□ 0.37
Sox18P43680 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.37■□□□□ 0.37
Sox18P43680 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Sox18P43680 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.37■□□□□ 0.37
Sox18P43680 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sox18P43680 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sox18P43680 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sox18P43680 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox18P43680 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sox18P43680 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox18P43680 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sox18P43680 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox18P43680 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sox18P43680 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sox18P43680 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sox18P43680 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox18P43680 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox18P43680 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox18P43680 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox18P43680 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox18P43680 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox18P43680 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.36■□□□□ 0.37
Sox18P43680 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox18P43680 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.35■□□□□ 0.37
Sox18P43680 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox18P43680 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox18P43680 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox18P43680 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox18P43680 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Sox18P43680 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox18P43680 Gm15375-201ENSMUST00000119510 849 ntBASIC17.35■□□□□ 0.37
Sox18P43680 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Sox18P43680 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.35■□□□□ 0.37
Sox18P43680 Gm17971-201ENSMUST00000190239 806 ntBASIC17.35■□□□□ 0.37
Sox18P43680 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.35■□□□□ 0.37
Sox18P43680 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox18P43680 Gm45058-201ENSMUST00000205810 766 ntBASIC17.35■□□□□ 0.37
Sox18P43680 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.35■□□□□ 0.37
Sox18P43680 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox18P43680 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms