Protein–RNA interactions for Protein: P35583

Foxa2, Hepatocyte nuclear factor 3-beta, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa2P35583 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Foxa2P35583 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Foxa2P35583 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Foxa2P35583 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Foxa2P35583 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Foxa2P35583 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Foxa2P35583 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Foxa2P35583 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Foxa2P35583 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Foxa2P35583 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Foxa2P35583 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Foxa2P35583 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Foxa2P35583 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Foxa2P35583 Gm43672-201ENSMUST00000199072 1731 ntBASIC15.3■□□□□ 0.04
Foxa2P35583 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Foxa2P35583 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.3■□□□□ 0.04
Foxa2P35583 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Foxa2P35583 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Foxa2P35583 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Foxa2P35583 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Foxa2P35583 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Foxa2P35583 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Foxa2P35583 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC15.29■□□□□ 0.04
Foxa2P35583 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Foxa2P35583 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Foxa2P35583 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC15.29■□□□□ 0.04
Foxa2P35583 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Foxa2P35583 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Foxa2P35583 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Foxa2P35583 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Foxa2P35583 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Foxa2P35583 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Foxa2P35583 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Foxa2P35583 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Foxa2P35583 Tgds-204ENSMUST00000228543 1594 ntBASIC15.28■□□□□ 0.04
Foxa2P35583 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Foxa2P35583 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Foxa2P35583 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Foxa2P35583 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Foxa2P35583 Gm7514-201ENSMUST00000209475 934 ntBASIC15.28■□□□□ 0.04
Foxa2P35583 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Foxa2P35583 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Foxa2P35583 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC15.28■□□□□ 0.04
Foxa2P35583 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Foxa2P35583 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Foxa2P35583 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Foxa2P35583 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Foxa2P35583 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Foxa2P35583 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Foxa2P35583 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Foxa2P35583 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Foxa2P35583 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Foxa2P35583 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Foxa2P35583 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Foxa2P35583 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Foxa2P35583 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Foxa2P35583 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Foxa2P35583 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Foxa2P35583 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Foxa2P35583 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC15.27■□□□□ 0.04
Foxa2P35583 Gm42642-201ENSMUST00000200683 355 ntBASIC15.27■□□□□ 0.04
Foxa2P35583 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Foxa2P35583 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Foxa2P35583 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Foxa2P35583 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.27■□□□□ 0.03
Foxa2P35583 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Foxa2P35583 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Foxa2P35583 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Foxa2P35583 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Foxa2P35583 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Foxa2P35583 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.26■□□□□ 0.03
Foxa2P35583 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC15.26■□□□□ 0.03
Foxa2P35583 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Foxa2P35583 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Foxa2P35583 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Foxa2P35583 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Foxa2P35583 Gm18671-201ENSMUST00000214826 683 ntBASIC15.26■□□□□ 0.03
Foxa2P35583 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Foxa2P35583 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Foxa2P35583 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Foxa2P35583 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Foxa2P35583 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Foxa2P35583 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Foxa2P35583 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC15.26■□□□□ 0.03
Foxa2P35583 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.26■□□□□ 0.03
Foxa2P35583 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Foxa2P35583 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Foxa2P35583 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.25■□□□□ 0.03
Foxa2P35583 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Foxa2P35583 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Foxa2P35583 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Foxa2P35583 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Foxa2P35583 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC15.25■□□□□ 0.03
Foxa2P35583 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Foxa2P35583 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Foxa2P35583 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Foxa2P35583 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Foxa2P35583 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Foxa2P35583 Gm5874-201ENSMUST00000096101 508 ntBASIC15.25■□□□□ 0.03
Foxa2P35583 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms