Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nedd8P29595 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nedd8P29595 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nedd8P29595 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nedd8P29595 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nedd8P29595 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nedd8P29595 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nedd8P29595 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
Nedd8P29595 Gm11175-201ENSMUST00000116172 543 ntBASIC16.87■□□□□ 0.29
Nedd8P29595 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nedd8P29595 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nedd8P29595 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nedd8P29595 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nedd8P29595 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nedd8P29595 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nedd8P29595 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nedd8P29595 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.87■□□□□ 0.29
Nedd8P29595 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nedd8P29595 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nedd8P29595 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nedd8P29595 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.86■□□□□ 0.29
Nedd8P29595 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nedd8P29595 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Nedd8P29595 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nedd8P29595 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nedd8P29595 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Nedd8P29595 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.86■□□□□ 0.29
Nedd8P29595 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Nedd8P29595 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC16.86■□□□□ 0.29
Nedd8P29595 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Nedd8P29595 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nedd8P29595 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nedd8P29595 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nedd8P29595 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nedd8P29595 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nedd8P29595 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Nedd8P29595 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nedd8P29595 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nedd8P29595 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.85■□□□□ 0.29
Nedd8P29595 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nedd8P29595 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Nedd8P29595 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nedd8P29595 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.85■□□□□ 0.29
Nedd8P29595 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nedd8P29595 Serp2-204ENSMUST00000228055 705 ntBASIC16.85■□□□□ 0.29
Nedd8P29595 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.85■□□□□ 0.29
Nedd8P29595 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nedd8P29595 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nedd8P29595 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nedd8P29595 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.85■□□□□ 0.29
Nedd8P29595 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nedd8P29595 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nedd8P29595 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nedd8P29595 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nedd8P29595 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.85■□□□□ 0.29
Nedd8P29595 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nedd8P29595 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nedd8P29595 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nedd8P29595 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nedd8P29595 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nedd8P29595 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nedd8P29595 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nedd8P29595 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.84■□□□□ 0.29
Nedd8P29595 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nedd8P29595 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nedd8P29595 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nedd8P29595 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nedd8P29595 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nedd8P29595 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Nedd8P29595 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
Nedd8P29595 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nedd8P29595 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nedd8P29595 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nedd8P29595 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.83■□□□□ 0.29
Nedd8P29595 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Nedd8P29595 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nedd8P29595 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.29
Nedd8P29595 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nedd8P29595 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nedd8P29595 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.83■□□□□ 0.28
Nedd8P29595 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nedd8P29595 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nedd8P29595 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nedd8P29595 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nedd8P29595 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nedd8P29595 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nedd8P29595 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nedd8P29595 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nedd8P29595 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Nedd8P29595 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nedd8P29595 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nedd8P29595 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Nedd8P29595 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Nedd8P29595 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nedd8P29595 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nedd8P29595 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nedd8P29595 Gm40881-201ENSMUST00000223397 166 ntBASIC16.82■□□□□ 0.28
Nedd8P29595 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Nedd8P29595 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nedd8P29595 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms