Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC21.05■□□□□ 0.96
Vcam1P29533 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Vcam1P29533 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC21.05■□□□□ 0.96
Vcam1P29533 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC21.05■□□□□ 0.96
Vcam1P29533 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Vcam1P29533 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Vcam1P29533 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Vcam1P29533 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Vcam1P29533 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Vcam1P29533 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Vcam1P29533 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Vcam1P29533 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC21.04■□□□□ 0.96
Vcam1P29533 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Vcam1P29533 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Vcam1P29533 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Vcam1P29533 Gm9987-201ENSMUST00000069768 567 ntBASIC21.04■□□□□ 0.96
Vcam1P29533 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC21.04■□□□□ 0.96
Vcam1P29533 AC121961.1-201ENSMUST00000218594 1779 ntBASIC21.04■□□□□ 0.96
Vcam1P29533 Gm5784-201ENSMUST00000179344 2478 ntBASIC21.04■□□□□ 0.96
Vcam1P29533 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Vcam1P29533 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Vcam1P29533 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Vcam1P29533 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Vcam1P29533 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vcam1P29533 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Vcam1P29533 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vcam1P29533 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vcam1P29533 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vcam1P29533 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vcam1P29533 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vcam1P29533 Gm38308-201ENSMUST00000194934 1809 ntBASIC21.03■□□□□ 0.96
Vcam1P29533 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Vcam1P29533 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Vcam1P29533 Gm11643-201ENSMUST00000119578 864 ntBASIC21.02■□□□□ 0.96
Vcam1P29533 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Vcam1P29533 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Vcam1P29533 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Vcam1P29533 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Vcam1P29533 Notumos-201ENSMUST00000151998 2659 ntBASIC21.02■□□□□ 0.96
Vcam1P29533 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Vcam1P29533 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC21.02■□□□□ 0.96
Vcam1P29533 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Vcam1P29533 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Vcam1P29533 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
Vcam1P29533 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Vcam1P29533 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Vcam1P29533 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Vcam1P29533 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Vcam1P29533 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Vcam1P29533 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Vcam1P29533 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Vcam1P29533 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Vcam1P29533 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC21.01■□□□□ 0.95
Vcam1P29533 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC21.01■□□□□ 0.95
Vcam1P29533 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC21.01■□□□□ 0.95
Vcam1P29533 Odf3b-204ENSMUST00000227834 930 ntBASIC21.01■□□□□ 0.95
Vcam1P29533 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Vcam1P29533 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Vcam1P29533 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Vcam1P29533 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Vcam1P29533 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Vcam1P29533 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Vcam1P29533 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Vcam1P29533 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC21■□□□□ 0.95
Vcam1P29533 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC21■□□□□ 0.95
Vcam1P29533 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Vcam1P29533 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Vcam1P29533 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC21■□□□□ 0.95
Vcam1P29533 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC21■□□□□ 0.95
Vcam1P29533 Gm3375-201ENSMUST00000203929 796 ntBASIC21■□□□□ 0.95
Vcam1P29533 AC156016.1-201ENSMUST00000227190 1035 ntBASIC21■□□□□ 0.95
Vcam1P29533 Otx2os1-204ENSMUST00000227221 751 ntBASIC21■□□□□ 0.95
Vcam1P29533 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Vcam1P29533 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Vcam1P29533 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vcam1P29533 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vcam1P29533 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Vcam1P29533 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vcam1P29533 Gm6433-201ENSMUST00000118634 875 ntBASIC20.99■□□□□ 0.95
Vcam1P29533 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.99■□□□□ 0.95
Vcam1P29533 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vcam1P29533 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Vcam1P29533 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Vcam1P29533 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vcam1P29533 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vcam1P29533 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vcam1P29533 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Vcam1P29533 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Vcam1P29533 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.99■□□□□ 0.95
Vcam1P29533 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.98■□□□□ 0.95
Vcam1P29533 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vcam1P29533 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vcam1P29533 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vcam1P29533 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Vcam1P29533 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC20.98■□□□□ 0.95
Vcam1P29533 Timm23-208ENSMUST00000226683 750 ntBASIC20.98■□□□□ 0.95
Vcam1P29533 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vcam1P29533 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Vcam1P29533 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Vcam1P29533 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms