Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Usp53P15975 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Usp53P15975 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp53P15975 Gm44544-201ENSMUST00000207052 1844 ntBASIC21.09■□□□□ 0.97
Usp53P15975 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Usp53P15975 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Usp53P15975 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Usp53P15975 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp53P15975 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Usp53P15975 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp53P15975 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp53P15975 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Usp53P15975 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp53P15975 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC21.09■□□□□ 0.97
Usp53P15975 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Usp53P15975 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Usp53P15975 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Usp53P15975 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Usp53P15975 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Usp53P15975 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC21.08■□□□□ 0.97
Usp53P15975 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Usp53P15975 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Usp53P15975 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Usp53P15975 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Usp53P15975 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Usp53P15975 Gm38308-201ENSMUST00000194934 1809 ntBASIC21.08■□□□□ 0.96
Usp53P15975 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Usp53P15975 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp53P15975 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp53P15975 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Usp53P15975 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp53P15975 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp53P15975 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Usp53P15975 Gm38285-201ENSMUST00000192928 922 ntBASIC21.07■□□□□ 0.96
Usp53P15975 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp53P15975 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp53P15975 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp53P15975 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp53P15975 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp53P15975 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp53P15975 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC21.07■□□□□ 0.96
Usp53P15975 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp53P15975 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp53P15975 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Usp53P15975 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp53P15975 Gm45906-201ENSMUST00000208911 1430 ntBASIC21.06■□□□□ 0.96
Usp53P15975 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Usp53P15975 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC21.06■□□□□ 0.96
Usp53P15975 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
Usp53P15975 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC21.06■□□□□ 0.96
Usp53P15975 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Usp53P15975 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp53P15975 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Usp53P15975 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Usp53P15975 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Usp53P15975 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp53P15975 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC21.05■□□□□ 0.96
Usp53P15975 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Usp53P15975 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
Usp53P15975 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Usp53P15975 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Usp53P15975 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC21.04■□□□□ 0.96
Usp53P15975 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Usp53P15975 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Usp53P15975 AC121961.1-201ENSMUST00000218594 1779 ntBASIC21.03■□□□□ 0.96
Usp53P15975 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
Usp53P15975 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC21.03■□□□□ 0.96
Usp53P15975 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp53P15975 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC21.03■□□□□ 0.96
Usp53P15975 Gm15378-201ENSMUST00000121894 207 ntBASIC21.03■□□□□ 0.96
Usp53P15975 AC153881.1-201ENSMUST00000214448 284 ntBASIC21.03■□□□□ 0.96
Usp53P15975 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Usp53P15975 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Usp53P15975 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Usp53P15975 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp53P15975 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp53P15975 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Usp53P15975 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Usp53P15975 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp53P15975 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Usp53P15975 Gm38345-201ENSMUST00000192635 1748 ntBASIC21.02■□□□□ 0.96
Usp53P15975 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp53P15975 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Usp53P15975 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp53P15975 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp53P15975 Gm9194-201ENSMUST00000220749 1447 ntBASIC21.02■□□□□ 0.96
Usp53P15975 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp53P15975 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp53P15975 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp53P15975 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp53P15975 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Usp53P15975 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp53P15975 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Usp53P15975 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Usp53P15975 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC21.01■□□□□ 0.95
Usp53P15975 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Usp53P15975 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp53P15975 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp53P15975 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp53P15975 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms