Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.28■□□□□ 0.84
Hoxc6P10629 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hoxc6P10629 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC20.28■□□□□ 0.84
Hoxc6P10629 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.28■□□□□ 0.84
Hoxc6P10629 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Hoxc6P10629 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Hoxc6P10629 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC20.28■□□□□ 0.84
Hoxc6P10629 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hoxc6P10629 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Hoxc6P10629 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hoxc6P10629 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Hoxc6P10629 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hoxc6P10629 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.27■□□□□ 0.84
Hoxc6P10629 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Hoxc6P10629 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hoxc6P10629 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Hoxc6P10629 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Hoxc6P10629 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hoxc6P10629 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hoxc6P10629 Gm10819-201ENSMUST00000099988 561 ntBASIC20.27■□□□□ 0.84
Hoxc6P10629 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hoxc6P10629 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hoxc6P10629 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Hoxc6P10629 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Hoxc6P10629 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxc6P10629 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxc6P10629 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.26■□□□□ 0.83
Hoxc6P10629 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxc6P10629 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxc6P10629 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxc6P10629 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxc6P10629 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxc6P10629 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC20.26■□□□□ 0.83
Hoxc6P10629 Gm10459-201ENSMUST00000202708 1155 ntBASIC20.26■□□□□ 0.83
Hoxc6P10629 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC20.26■□□□□ 0.83
Hoxc6P10629 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxc6P10629 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxc6P10629 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxc6P10629 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxc6P10629 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxc6P10629 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.25■□□□□ 0.83
Hoxc6P10629 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
Hoxc6P10629 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxc6P10629 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.25■□□□□ 0.83
Hoxc6P10629 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Hoxc6P10629 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxc6P10629 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxc6P10629 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.25■□□□□ 0.83
Hoxc6P10629 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxc6P10629 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.25■□□□□ 0.83
Hoxc6P10629 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxc6P10629 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxc6P10629 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxc6P10629 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxc6P10629 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxc6P10629 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxc6P10629 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxc6P10629 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Hoxc6P10629 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxc6P10629 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxc6P10629 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Hoxc6P10629 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxc6P10629 Gm10654-201ENSMUST00000098653 1633 ntBASIC20.24■□□□□ 0.83
Hoxc6P10629 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Hoxc6P10629 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Hoxc6P10629 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.23■□□□□ 0.83
Hoxc6P10629 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hoxc6P10629 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hoxc6P10629 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC20.23■□□□□ 0.83
Hoxc6P10629 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hoxc6P10629 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hoxc6P10629 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hoxc6P10629 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hoxc6P10629 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.23■□□□□ 0.83
Hoxc6P10629 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Hoxc6P10629 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hoxc6P10629 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Hoxc6P10629 AC159205.6-201ENSMUST00000224935 887 ntBASIC20.22■□□□□ 0.83
Hoxc6P10629 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hoxc6P10629 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hoxc6P10629 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Hoxc6P10629 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hoxc6P10629 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxc6P10629 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxc6P10629 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Hoxc6P10629 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxc6P10629 Gm44544-201ENSMUST00000207052 1844 ntBASIC20.21■□□□□ 0.83
Hoxc6P10629 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxc6P10629 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxc6P10629 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxc6P10629 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxc6P10629 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.21■□□□□ 0.83
Hoxc6P10629 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxc6P10629 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hoxc6P10629 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Hoxc6P10629 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hoxc6P10629 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Hoxc6P10629 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC20.2■□□□□ 0.82
Hoxc6P10629 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hoxc6P10629 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms