Protein–RNA interactions for Protein: P07903

Ercc1, DNA excision repair protein ERCC-1, mousemouse

Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1P07903 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ercc1P07903 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ercc1P07903 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ercc1P07903 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ercc1P07903 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ercc1P07903 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ercc1P07903 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC15.23■□□□□ 0.03
Ercc1P07903 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ercc1P07903 Gm5576-201ENSMUST00000075809 1236 ntBASIC15.23■□□□□ 0.03
Ercc1P07903 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ercc1P07903 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Ercc1P07903 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ercc1P07903 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ercc1P07903 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ercc1P07903 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ercc1P07903 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ercc1P07903 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ercc1P07903 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.23■□□□□ 0.03
Ercc1P07903 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ercc1P07903 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ercc1P07903 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Ercc1P07903 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ercc1P07903 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ercc1P07903 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC15.22■□□□□ 0.03
Ercc1P07903 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ercc1P07903 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ercc1P07903 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ercc1P07903 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ercc1P07903 Gm8969-201ENSMUST00000199694 526 ntBASIC15.22■□□□□ 0.03
Ercc1P07903 AC140930.3-201ENSMUST00000222935 274 ntBASIC15.22■□□□□ 0.03
Ercc1P07903 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ercc1P07903 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.22■□□□□ 0.03
Ercc1P07903 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ercc1P07903 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ercc1P07903 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ercc1P07903 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ercc1P07903 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.22■□□□□ 0.03
Ercc1P07903 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ercc1P07903 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ercc1P07903 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ercc1P07903 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ercc1P07903 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ercc1P07903 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Ercc1P07903 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Ercc1P07903 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ercc1P07903 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Ercc1P07903 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ercc1P07903 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ercc1P07903 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ercc1P07903 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ercc1P07903 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Ercc1P07903 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ercc1P07903 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Ercc1P07903 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ercc1P07903 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC15.21■□□□□ 0.02
Ercc1P07903 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ercc1P07903 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ercc1P07903 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ercc1P07903 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ercc1P07903 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ercc1P07903 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ercc1P07903 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ercc1P07903 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ercc1P07903 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Ercc1P07903 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ercc1P07903 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ercc1P07903 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ercc1P07903 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ercc1P07903 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ercc1P07903 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Ercc1P07903 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ercc1P07903 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ercc1P07903 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ercc1P07903 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ercc1P07903 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Ercc1P07903 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ercc1P07903 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Ercc1P07903 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC15.19■□□□□ 0.02
Ercc1P07903 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ercc1P07903 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ercc1P07903 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC15.19■□□□□ 0.02
Ercc1P07903 Gm12821-201ENSMUST00000120022 600 ntBASIC15.19■□□□□ 0.02
Ercc1P07903 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC15.19■□□□□ 0.02
Ercc1P07903 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ercc1P07903 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ercc1P07903 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ercc1P07903 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ercc1P07903 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ercc1P07903 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Ercc1P07903 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ercc1P07903 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Ercc1P07903 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ercc1P07903 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ercc1P07903 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ercc1P07903 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ercc1P07903 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ercc1P07903 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Ercc1P07903 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC15.17■□□□□ 0.02
Ercc1P07903 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ercc1P07903 Gm9194-201ENSMUST00000220749 1447 ntBASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms