Protein–RNA interactions for Protein: P04202

Tgfb1, Transforming growth factor beta-1, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfb1P04202 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tgfb1P04202 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tgfb1P04202 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tgfb1P04202 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tgfb1P04202 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tgfb1P04202 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.83■□□□□ 0.28
Tgfb1P04202 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tgfb1P04202 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tgfb1P04202 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Tgfb1P04202 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tgfb1P04202 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Tgfb1P04202 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tgfb1P04202 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Tgfb1P04202 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tgfb1P04202 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.82■□□□□ 0.28
Tgfb1P04202 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC16.82■□□□□ 0.28
Tgfb1P04202 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tgfb1P04202 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Tgfb1P04202 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Tgfb1P04202 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tgfb1P04202 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Tgfb1P04202 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tgfb1P04202 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.81■□□□□ 0.28
Tgfb1P04202 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tgfb1P04202 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tgfb1P04202 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tgfb1P04202 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Tgfb1P04202 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
Tgfb1P04202 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Tgfb1P04202 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
Tgfb1P04202 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Tgfb1P04202 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tgfb1P04202 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tgfb1P04202 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tgfb1P04202 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.81■□□□□ 0.28
Tgfb1P04202 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Tgfb1P04202 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Tgfb1P04202 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Tgfb1P04202 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tgfb1P04202 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tgfb1P04202 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tgfb1P04202 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Tgfb1P04202 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tgfb1P04202 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tgfb1P04202 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tgfb1P04202 Gm22325-201ENSMUST00000158904 308 ntBASIC16.8■□□□□ 0.28
Tgfb1P04202 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tgfb1P04202 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.8■□□□□ 0.28
Tgfb1P04202 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tgfb1P04202 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tgfb1P04202 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tgfb1P04202 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tgfb1P04202 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tgfb1P04202 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tgfb1P04202 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tgfb1P04202 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Tgfb1P04202 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Tgfb1P04202 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.79■□□□□ 0.28
Tgfb1P04202 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Tgfb1P04202 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
Tgfb1P04202 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tgfb1P04202 Gm8495-201ENSMUST00000188740 694 ntBASIC16.79■□□□□ 0.28
Tgfb1P04202 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tgfb1P04202 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tgfb1P04202 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tgfb1P04202 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tgfb1P04202 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tgfb1P04202 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Tgfb1P04202 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tgfb1P04202 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tgfb1P04202 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.79■□□□□ 0.28
Tgfb1P04202 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tgfb1P04202 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tgfb1P04202 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tgfb1P04202 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.78■□□□□ 0.28
Tgfb1P04202 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Tgfb1P04202 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tgfb1P04202 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.78■□□□□ 0.28
Tgfb1P04202 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tgfb1P04202 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Tgfb1P04202 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Tgfb1P04202 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tgfb1P04202 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Tgfb1P04202 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.78■□□□□ 0.28
Tgfb1P04202 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tgfb1P04202 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tgfb1P04202 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Tgfb1P04202 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tgfb1P04202 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tgfb1P04202 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.77■□□□□ 0.28
Tgfb1P04202 Gm42569-201ENSMUST00000200539 472 ntBASIC16.77■□□□□ 0.28
Tgfb1P04202 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.77■□□□□ 0.28
Tgfb1P04202 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tgfb1P04202 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tgfb1P04202 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tgfb1P04202 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Tgfb1P04202 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tgfb1P04202 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Tgfb1P04202 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Tgfb1P04202 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms