Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hcn1O88704 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hcn1O88704 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Hcn1O88704 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.39■□□□□ 0.37
Hcn1O88704 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hcn1O88704 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hcn1O88704 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hcn1O88704 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Hcn1O88704 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hcn1O88704 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hcn1O88704 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hcn1O88704 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Hcn1O88704 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hcn1O88704 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Hcn1O88704 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.38■□□□□ 0.37
Hcn1O88704 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hcn1O88704 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hcn1O88704 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Hcn1O88704 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.37■□□□□ 0.37
Hcn1O88704 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hcn1O88704 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.37■□□□□ 0.37
Hcn1O88704 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Hcn1O88704 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hcn1O88704 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hcn1O88704 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hcn1O88704 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.37■□□□□ 0.37
Hcn1O88704 Nespas-201ENSMUST00000143738 1083 ntBASIC17.37■□□□□ 0.37
Hcn1O88704 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hcn1O88704 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hcn1O88704 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Hcn1O88704 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hcn1O88704 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hcn1O88704 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hcn1O88704 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Hcn1O88704 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Hcn1O88704 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hcn1O88704 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hcn1O88704 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hcn1O88704 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hcn1O88704 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Hcn1O88704 Gm29257-201ENSMUST00000186115 639 ntBASIC17.36■□□□□ 0.37
Hcn1O88704 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.36■□□□□ 0.37
Hcn1O88704 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.36■□□□□ 0.37
Hcn1O88704 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Hcn1O88704 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hcn1O88704 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hcn1O88704 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Hcn1O88704 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hcn1O88704 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hcn1O88704 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hcn1O88704 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hcn1O88704 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Hcn1O88704 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hcn1O88704 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hcn1O88704 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hcn1O88704 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hcn1O88704 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hcn1O88704 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Hcn1O88704 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Hcn1O88704 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.35■□□□□ 0.37
Hcn1O88704 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hcn1O88704 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Hcn1O88704 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hcn1O88704 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hcn1O88704 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Hcn1O88704 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hcn1O88704 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hcn1O88704 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hcn1O88704 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Hcn1O88704 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hcn1O88704 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hcn1O88704 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hcn1O88704 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hcn1O88704 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Hcn1O88704 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Hcn1O88704 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hcn1O88704 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hcn1O88704 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.34■□□□□ 0.37
Hcn1O88704 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hcn1O88704 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hcn1O88704 Gm12933-201ENSMUST00000120203 872 ntBASIC17.34■□□□□ 0.37
Hcn1O88704 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hcn1O88704 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Hcn1O88704 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hcn1O88704 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hcn1O88704 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hcn1O88704 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Hcn1O88704 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Hcn1O88704 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hcn1O88704 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hcn1O88704 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.33■□□□□ 0.37
Hcn1O88704 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hcn1O88704 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hcn1O88704 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hcn1O88704 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hcn1O88704 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Hcn1O88704 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hcn1O88704 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hcn1O88704 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hcn1O88704 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms