Protein–RNA interactions for Protein: O54915

Nr1i2, Nuclear receptor subfamily 1 group I member 2, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i2O54915 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nr1i2O54915 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nr1i2O54915 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nr1i2O54915 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC20.34■□□□□ 0.85
Nr1i2O54915 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.34■□□□□ 0.85
Nr1i2O54915 Gm26524-201ENSMUST00000192339 390 ntBASIC20.34■□□□□ 0.85
Nr1i2O54915 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20.34■□□□□ 0.85
Nr1i2O54915 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nr1i2O54915 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nr1i2O54915 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nr1i2O54915 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Nr1i2O54915 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nr1i2O54915 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.33■□□□□ 0.85
Nr1i2O54915 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nr1i2O54915 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nr1i2O54915 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Nr1i2O54915 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nr1i2O54915 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nr1i2O54915 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.33■□□□□ 0.85
Nr1i2O54915 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.33■□□□□ 0.85
Nr1i2O54915 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Nr1i2O54915 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nr1i2O54915 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nr1i2O54915 Grk6-206ENSMUST00000224995 2971 ntBASIC20.33■□□□□ 0.84
Nr1i2O54915 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nr1i2O54915 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nr1i2O54915 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nr1i2O54915 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nr1i2O54915 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Nr1i2O54915 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Nr1i2O54915 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nr1i2O54915 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nr1i2O54915 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nr1i2O54915 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Nr1i2O54915 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nr1i2O54915 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nr1i2O54915 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Nr1i2O54915 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.32■□□□□ 0.84
Nr1i2O54915 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.32■□□□□ 0.84
Nr1i2O54915 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nr1i2O54915 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.32■□□□□ 0.84
Nr1i2O54915 Fst-202ENSMUST00000223640 2612 ntBASIC20.32■□□□□ 0.84
Nr1i2O54915 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nr1i2O54915 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.31■□□□□ 0.84
Nr1i2O54915 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nr1i2O54915 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Nr1i2O54915 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nr1i2O54915 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nr1i2O54915 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nr1i2O54915 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.31■□□□□ 0.84
Nr1i2O54915 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Nr1i2O54915 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Nr1i2O54915 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Nr1i2O54915 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Nr1i2O54915 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC20.31■□□□□ 0.84
Nr1i2O54915 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nr1i2O54915 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
Nr1i2O54915 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nr1i2O54915 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nr1i2O54915 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nr1i2O54915 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nr1i2O54915 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nr1i2O54915 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nr1i2O54915 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nr1i2O54915 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.3■□□□□ 0.84
Nr1i2O54915 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nr1i2O54915 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nr1i2O54915 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Nr1i2O54915 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nr1i2O54915 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.3■□□□□ 0.84
Nr1i2O54915 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nr1i2O54915 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nr1i2O54915 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Nr1i2O54915 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nr1i2O54915 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nr1i2O54915 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nr1i2O54915 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Nr1i2O54915 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Nr1i2O54915 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nr1i2O54915 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nr1i2O54915 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nr1i2O54915 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.29■□□□□ 0.84
Nr1i2O54915 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Nr1i2O54915 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Nr1i2O54915 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nr1i2O54915 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nr1i2O54915 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nr1i2O54915 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nr1i2O54915 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nr1i2O54915 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Nr1i2O54915 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.28■□□□□ 0.84
Nr1i2O54915 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Nr1i2O54915 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Nr1i2O54915 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Nr1i2O54915 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.28■□□□□ 0.84
Nr1i2O54915 Rab3c-203ENSMUST00000224180 967 ntBASIC20.28■□□□□ 0.84
Nr1i2O54915 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nr1i2O54915 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.28■□□□□ 0.84
Nr1i2O54915 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Nr1i2O54915 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms