Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Nr1i3O35627 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nr1i3O35627 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.55■□□□□ 0.72
Nr1i3O35627 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nr1i3O35627 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Nr1i3O35627 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nr1i3O35627 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Nr1i3O35627 Nespas-201ENSMUST00000143738 1083 ntBASIC19.55■□□□□ 0.72
Nr1i3O35627 Gm10033-202ENSMUST00000211874 928 ntBASIC19.55■□□□□ 0.72
Nr1i3O35627 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nr1i3O35627 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nr1i3O35627 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.55■□□□□ 0.72
Nr1i3O35627 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Nr1i3O35627 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nr1i3O35627 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nr1i3O35627 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nr1i3O35627 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Nr1i3O35627 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nr1i3O35627 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nr1i3O35627 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Nr1i3O35627 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Nr1i3O35627 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Nr1i3O35627 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.54■□□□□ 0.72
Nr1i3O35627 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Nr1i3O35627 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nr1i3O35627 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nr1i3O35627 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nr1i3O35627 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nr1i3O35627 Gm7514-201ENSMUST00000209475 934 ntBASIC19.53■□□□□ 0.72
Nr1i3O35627 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nr1i3O35627 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nr1i3O35627 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nr1i3O35627 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nr1i3O35627 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nr1i3O35627 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.52■□□□□ 0.72
Nr1i3O35627 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nr1i3O35627 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Nr1i3O35627 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nr1i3O35627 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Nr1i3O35627 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nr1i3O35627 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Nr1i3O35627 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Nr1i3O35627 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
Nr1i3O35627 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Nr1i3O35627 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.52■□□□□ 0.72
Nr1i3O35627 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nr1i3O35627 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
Nr1i3O35627 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Nr1i3O35627 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nr1i3O35627 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.52■□□□□ 0.71
Nr1i3O35627 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
Nr1i3O35627 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nr1i3O35627 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.51■□□□□ 0.71
Nr1i3O35627 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nr1i3O35627 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nr1i3O35627 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nr1i3O35627 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nr1i3O35627 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Nr1i3O35627 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nr1i3O35627 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nr1i3O35627 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.51■□□□□ 0.71
Nr1i3O35627 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nr1i3O35627 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nr1i3O35627 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nr1i3O35627 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nr1i3O35627 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.5■□□□□ 0.71
Nr1i3O35627 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nr1i3O35627 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Nr1i3O35627 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Nr1i3O35627 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nr1i3O35627 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.5■□□□□ 0.71
Nr1i3O35627 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Nr1i3O35627 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Nr1i3O35627 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nr1i3O35627 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nr1i3O35627 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nr1i3O35627 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nr1i3O35627 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nr1i3O35627 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nr1i3O35627 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
Nr1i3O35627 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nr1i3O35627 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nr1i3O35627 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nr1i3O35627 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Nr1i3O35627 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Nr1i3O35627 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Nr1i3O35627 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Nr1i3O35627 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.49■□□□□ 0.71
Nr1i3O35627 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.49■□□□□ 0.71
Nr1i3O35627 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nr1i3O35627 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.49■□□□□ 0.71
Nr1i3O35627 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.48■□□□□ 0.71
Nr1i3O35627 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nr1i3O35627 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nr1i3O35627 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Nr1i3O35627 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.48■□□□□ 0.71
Nr1i3O35627 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nr1i3O35627 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.48■□□□□ 0.71
Nr1i3O35627 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.48■□□□□ 0.71
Nr1i3O35627 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms