Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Clcn6O35454 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Clcn6O35454 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Clcn6O35454 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Clcn6O35454 Gm14542-201ENSMUST00000118460 1248 ntBASIC19.22■□□□□ 0.67
Clcn6O35454 Gm42919-201ENSMUST00000197753 1284 ntBASIC19.22■□□□□ 0.67
Clcn6O35454 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.22■□□□□ 0.67
Clcn6O35454 Gm45166-201ENSMUST00000209073 683 ntBASIC19.22■□□□□ 0.67
Clcn6O35454 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clcn6O35454 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clcn6O35454 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Clcn6O35454 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Clcn6O35454 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Clcn6O35454 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clcn6O35454 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Clcn6O35454 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Clcn6O35454 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Clcn6O35454 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Clcn6O35454 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clcn6O35454 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clcn6O35454 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clcn6O35454 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.21■□□□□ 0.67
Clcn6O35454 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clcn6O35454 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Clcn6O35454 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Clcn6O35454 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.21■□□□□ 0.67
Clcn6O35454 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Clcn6O35454 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clcn6O35454 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clcn6O35454 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clcn6O35454 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clcn6O35454 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clcn6O35454 Fst-202ENSMUST00000223640 2612 ntBASIC19.21■□□□□ 0.66
Clcn6O35454 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clcn6O35454 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clcn6O35454 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clcn6O35454 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Clcn6O35454 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Clcn6O35454 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clcn6O35454 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.2■□□□□ 0.66
Clcn6O35454 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clcn6O35454 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Clcn6O35454 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.2■□□□□ 0.66
Clcn6O35454 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clcn6O35454 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Clcn6O35454 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clcn6O35454 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clcn6O35454 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clcn6O35454 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clcn6O35454 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clcn6O35454 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.19■□□□□ 0.66
Clcn6O35454 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.19■□□□□ 0.66
Clcn6O35454 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Clcn6O35454 Gm26833-201ENSMUST00000180899 440 ntBASIC19.19■□□□□ 0.66
Clcn6O35454 Gm21147-201ENSMUST00000186046 913 ntBASIC19.19■□□□□ 0.66
Clcn6O35454 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clcn6O35454 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Clcn6O35454 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
Clcn6O35454 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clcn6O35454 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clcn6O35454 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.19■□□□□ 0.66
Clcn6O35454 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Clcn6O35454 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clcn6O35454 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clcn6O35454 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clcn6O35454 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clcn6O35454 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn6O35454 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn6O35454 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.18■□□□□ 0.66
Clcn6O35454 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn6O35454 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn6O35454 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.18■□□□□ 0.66
Clcn6O35454 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn6O35454 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn6O35454 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn6O35454 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn6O35454 Gm38216-201ENSMUST00000194872 1214 ntBASIC19.18■□□□□ 0.66
Clcn6O35454 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.18■□□□□ 0.66
Clcn6O35454 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn6O35454 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn6O35454 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn6O35454 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn6O35454 Gm45657-201ENSMUST00000211318 1349 ntBASIC19.18■□□□□ 0.66
Clcn6O35454 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.18■□□□□ 0.66
Clcn6O35454 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn6O35454 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn6O35454 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clcn6O35454 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clcn6O35454 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clcn6O35454 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Clcn6O35454 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clcn6O35454 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
Clcn6O35454 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Clcn6O35454 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Clcn6O35454 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clcn6O35454 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clcn6O35454 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clcn6O35454 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clcn6O35454 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Clcn6O35454 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms