Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Gm43017-201ENSMUST00000198296 752 ntBASIC18.64■□□□□ 0.57
Trove2O08848 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trove2O08848 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trove2O08848 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trove2O08848 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.57
Trove2O08848 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trove2O08848 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trove2O08848 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trove2O08848 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trove2O08848 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trove2O08848 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trove2O08848 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trove2O08848 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Trove2O08848 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trove2O08848 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trove2O08848 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.63■□□□□ 0.57
Trove2O08848 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Trove2O08848 Gm26833-201ENSMUST00000180899 440 ntBASIC18.63■□□□□ 0.57
Trove2O08848 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trove2O08848 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trove2O08848 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trove2O08848 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trove2O08848 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trove2O08848 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trove2O08848 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trove2O08848 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trove2O08848 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trove2O08848 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trove2O08848 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.63■□□□□ 0.57
Trove2O08848 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trove2O08848 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trove2O08848 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trove2O08848 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trove2O08848 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Trove2O08848 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trove2O08848 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Trove2O08848 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trove2O08848 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trove2O08848 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
Trove2O08848 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Trove2O08848 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.62■□□□□ 0.57
Trove2O08848 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trove2O08848 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Trove2O08848 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trove2O08848 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trove2O08848 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trove2O08848 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trove2O08848 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trove2O08848 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trove2O08848 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trove2O08848 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trove2O08848 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Trove2O08848 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trove2O08848 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trove2O08848 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trove2O08848 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Trove2O08848 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.61■□□□□ 0.57
Trove2O08848 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trove2O08848 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trove2O08848 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trove2O08848 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trove2O08848 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trove2O08848 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Trove2O08848 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Trove2O08848 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trove2O08848 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trove2O08848 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trove2O08848 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Trove2O08848 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Trove2O08848 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trove2O08848 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trove2O08848 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trove2O08848 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trove2O08848 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Trove2O08848 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trove2O08848 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.59■□□□□ 0.57
Trove2O08848 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trove2O08848 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Trove2O08848 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.59■□□□□ 0.57
Trove2O08848 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trove2O08848 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trove2O08848 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Trove2O08848 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trove2O08848 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Trove2O08848 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trove2O08848 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Trove2O08848 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Trove2O08848 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trove2O08848 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trove2O08848 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.58■□□□□ 0.57
Trove2O08848 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Trove2O08848 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trove2O08848 Gm40848-201ENSMUST00000221998 324 ntBASIC18.58■□□□□ 0.56
Trove2O08848 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trove2O08848 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trove2O08848 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.58■□□□□ 0.56
Trove2O08848 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trove2O08848 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.58■□□□□ 0.56
Trove2O08848 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trove2O08848 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms