Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp35M0QWN7 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Usp35M0QWN7 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp35M0QWN7 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp35M0QWN7 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp35M0QWN7 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp35M0QWN7 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp35M0QWN7 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp35M0QWN7 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp35M0QWN7 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Usp35M0QWN7 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp35M0QWN7 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp35M0QWN7 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp35M0QWN7 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp35M0QWN7 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Usp35M0QWN7 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Usp35M0QWN7 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp35M0QWN7 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.47■□□□□ 0.71
Usp35M0QWN7 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp35M0QWN7 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp35M0QWN7 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Usp35M0QWN7 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp35M0QWN7 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Usp35M0QWN7 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp35M0QWN7 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp35M0QWN7 Gm12896-201ENSMUST00000118430 226 ntBASIC19.46■□□□□ 0.71
Usp35M0QWN7 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Usp35M0QWN7 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Usp35M0QWN7 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Usp35M0QWN7 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp35M0QWN7 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.46■□□□□ 0.71
Usp35M0QWN7 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Usp35M0QWN7 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp35M0QWN7 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Usp35M0QWN7 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp35M0QWN7 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp35M0QWN7 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Usp35M0QWN7 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp35M0QWN7 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.45■□□□□ 0.7
Usp35M0QWN7 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp35M0QWN7 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.45■□□□□ 0.7
Usp35M0QWN7 Gm27275-201ENSMUST00000184318 272 ntBASIC19.45■□□□□ 0.7
Usp35M0QWN7 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp35M0QWN7 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp35M0QWN7 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp35M0QWN7 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp35M0QWN7 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Usp35M0QWN7 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp35M0QWN7 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp35M0QWN7 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Usp35M0QWN7 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp35M0QWN7 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp35M0QWN7 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp35M0QWN7 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.44■□□□□ 0.7
Usp35M0QWN7 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp35M0QWN7 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Usp35M0QWN7 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Usp35M0QWN7 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Usp35M0QWN7 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.43■□□□□ 0.7
Usp35M0QWN7 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp35M0QWN7 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Usp35M0QWN7 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp35M0QWN7 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Usp35M0QWN7 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Usp35M0QWN7 Grk6-206ENSMUST00000224995 2971 ntBASIC19.43■□□□□ 0.7
Usp35M0QWN7 Rarb-207ENSMUST00000225921 2756 ntBASIC19.43■□□□□ 0.7
Usp35M0QWN7 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp35M0QWN7 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp35M0QWN7 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Usp35M0QWN7 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.43■□□□□ 0.7
Usp35M0QWN7 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Usp35M0QWN7 Gm2559-201ENSMUST00000201323 363 ntBASIC19.43■□□□□ 0.7
Usp35M0QWN7 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.43■□□□□ 0.7
Usp35M0QWN7 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Usp35M0QWN7 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp35M0QWN7 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.43■□□□□ 0.7
Usp35M0QWN7 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp35M0QWN7 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Usp35M0QWN7 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp35M0QWN7 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp35M0QWN7 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.43■□□□□ 0.7
Usp35M0QWN7 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp35M0QWN7 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp35M0QWN7 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.42■□□□□ 0.7
Usp35M0QWN7 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp35M0QWN7 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp35M0QWN7 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp35M0QWN7 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.42■□□□□ 0.7
Usp35M0QWN7 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.42■□□□□ 0.7
Usp35M0QWN7 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp35M0QWN7 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Usp35M0QWN7 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Usp35M0QWN7 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Usp35M0QWN7 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp35M0QWN7 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp35M0QWN7 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp35M0QWN7 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp35M0QWN7 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Usp35M0QWN7 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Usp35M0QWN7 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms