Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh1F7BJK1 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh1F7BJK1 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh1F7BJK1 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.38■□□□□ 0.21
Pcdh1F7BJK1 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh1F7BJK1 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh1F7BJK1 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh1F7BJK1 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh1F7BJK1 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh1F7BJK1 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh1F7BJK1 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh1F7BJK1 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh1F7BJK1 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh1F7BJK1 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh1F7BJK1 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh1F7BJK1 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh1F7BJK1 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh1F7BJK1 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh1F7BJK1 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh1F7BJK1 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh1F7BJK1 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Pcdh1F7BJK1 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.37■□□□□ 0.21
Pcdh1F7BJK1 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh1F7BJK1 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh1F7BJK1 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh1F7BJK1 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
Pcdh1F7BJK1 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.36■□□□□ 0.21
Pcdh1F7BJK1 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Pcdh1F7BJK1 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh1F7BJK1 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh1F7BJK1 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh1F7BJK1 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh1F7BJK1 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh1F7BJK1 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.36■□□□□ 0.21
Pcdh1F7BJK1 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh1F7BJK1 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.36■□□□□ 0.21
Pcdh1F7BJK1 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh1F7BJK1 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh1F7BJK1 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh1F7BJK1 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh1F7BJK1 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh1F7BJK1 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh1F7BJK1 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh1F7BJK1 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Pcdh1F7BJK1 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh1F7BJK1 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh1F7BJK1 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh1F7BJK1 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh1F7BJK1 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh1F7BJK1 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC16.35■□□□□ 0.21
Pcdh1F7BJK1 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.35■□□□□ 0.21
Pcdh1F7BJK1 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.35■□□□□ 0.21
Pcdh1F7BJK1 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh1F7BJK1 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh1F7BJK1 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh1F7BJK1 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Pcdh1F7BJK1 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh1F7BJK1 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh1F7BJK1 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh1F7BJK1 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh1F7BJK1 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
Pcdh1F7BJK1 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Pcdh1F7BJK1 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh1F7BJK1 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh1F7BJK1 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh1F7BJK1 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh1F7BJK1 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh1F7BJK1 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Pcdh1F7BJK1 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.34■□□□□ 0.21
Pcdh1F7BJK1 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh1F7BJK1 Gm6139-201ENSMUST00000079261 882 ntBASIC16.34■□□□□ 0.21
Pcdh1F7BJK1 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh1F7BJK1 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh1F7BJK1 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh1F7BJK1 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh1F7BJK1 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh1F7BJK1 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh1F7BJK1 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdh1F7BJK1 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdh1F7BJK1 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdh1F7BJK1 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Pcdh1F7BJK1 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh1F7BJK1 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh1F7BJK1 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh1F7BJK1 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh1F7BJK1 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh1F7BJK1 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Pcdh1F7BJK1 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh1F7BJK1 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh1F7BJK1 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh1F7BJK1 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh1F7BJK1 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh1F7BJK1 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh1F7BJK1 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh1F7BJK1 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh1F7BJK1 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh1F7BJK1 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh1F7BJK1 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh1F7BJK1 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh1F7BJK1 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms