Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Gm37055-201ENSMUST00000191866 133 ntBASIC18.45■□□□□ 0.54
Ccdc149F6V035 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc149F6V035 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc149F6V035 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Ccdc149F6V035 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc149F6V035 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Ccdc149F6V035 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Ccdc149F6V035 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc149F6V035 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc149F6V035 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc149F6V035 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc149F6V035 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc149F6V035 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc149F6V035 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc149F6V035 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc149F6V035 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc149F6V035 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc149F6V035 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.44■□□□□ 0.54
Ccdc149F6V035 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Ccdc149F6V035 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc149F6V035 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.44■□□□□ 0.54
Ccdc149F6V035 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Ccdc149F6V035 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.44■□□□□ 0.54
Ccdc149F6V035 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc149F6V035 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc149F6V035 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Ccdc149F6V035 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc149F6V035 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc149F6V035 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ccdc149F6V035 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Ccdc149F6V035 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc149F6V035 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
Ccdc149F6V035 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Ccdc149F6V035 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Ccdc149F6V035 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.43■□□□□ 0.54
Ccdc149F6V035 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc149F6V035 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc149F6V035 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc149F6V035 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc149F6V035 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc149F6V035 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc149F6V035 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ccdc149F6V035 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc149F6V035 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.42■□□□□ 0.54
Ccdc149F6V035 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc149F6V035 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.42■□□□□ 0.54
Ccdc149F6V035 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
Ccdc149F6V035 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Ccdc149F6V035 Mir6349-201ENSMUST00000184059 97 ntBASIC18.42■□□□□ 0.54
Ccdc149F6V035 Gm43183-201ENSMUST00000200632 547 ntBASIC18.42■□□□□ 0.54
Ccdc149F6V035 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Ccdc149F6V035 Gm18025-201ENSMUST00000221733 862 ntBASIC18.42■□□□□ 0.54
Ccdc149F6V035 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc149F6V035 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc149F6V035 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.42■□□□□ 0.54
Ccdc149F6V035 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc149F6V035 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.42■□□□□ 0.54
Ccdc149F6V035 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.42■□□□□ 0.54
Ccdc149F6V035 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc149F6V035 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ccdc149F6V035 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Ccdc149F6V035 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.41■□□□□ 0.54
Ccdc149F6V035 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc149F6V035 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Ccdc149F6V035 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc149F6V035 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc149F6V035 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc149F6V035 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc149F6V035 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc149F6V035 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.41■□□□□ 0.54
Ccdc149F6V035 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.41■□□□□ 0.54
Ccdc149F6V035 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.41■□□□□ 0.54
Ccdc149F6V035 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Ccdc149F6V035 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Ccdc149F6V035 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc149F6V035 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc149F6V035 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc149F6V035 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.41■□□□□ 0.54
Ccdc149F6V035 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc149F6V035 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc149F6V035 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc149F6V035 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Ccdc149F6V035 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc149F6V035 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
Ccdc149F6V035 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc149F6V035 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc149F6V035 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc149F6V035 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc149F6V035 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.4■□□□□ 0.54
Ccdc149F6V035 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.4■□□□□ 0.54
Ccdc149F6V035 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.4■□□□□ 0.54
Ccdc149F6V035 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc149F6V035 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Ccdc149F6V035 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc149F6V035 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc149F6V035 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ccdc149F6V035 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
Ccdc149F6V035 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc149F6V035 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc149F6V035 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms