Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Gm11127A7VMS2 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm11127A7VMS2 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm11127A7VMS2 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Gm11127A7VMS2 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm11127A7VMS2 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Gm11127A7VMS2 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm11127A7VMS2 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.1■□□□□ 0.17
Gm11127A7VMS2 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm11127A7VMS2 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm11127A7VMS2 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm11127A7VMS2 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm11127A7VMS2 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm11127A7VMS2 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16.1■□□□□ 0.17
Gm11127A7VMS2 Gm27454-201ENSMUST00000185090 204 ntBASIC16.1■□□□□ 0.17
Gm11127A7VMS2 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm11127A7VMS2 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Gm11127A7VMS2 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm11127A7VMS2 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.1■□□□□ 0.17
Gm11127A7VMS2 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm11127A7VMS2 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm11127A7VMS2 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.09■□□□□ 0.17
Gm11127A7VMS2 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Gm11127A7VMS2 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Gm11127A7VMS2 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Gm11127A7VMS2 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm11127A7VMS2 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Gm11127A7VMS2 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm11127A7VMS2 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Gm11127A7VMS2 Gm11421-201ENSMUST00000122124 294 ntBASIC16.09■□□□□ 0.17
Gm11127A7VMS2 Wdr70-203ENSMUST00000227371 1130 ntBASIC16.09■□□□□ 0.17
Gm11127A7VMS2 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm11127A7VMS2 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm11127A7VMS2 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm11127A7VMS2 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm11127A7VMS2 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Gm11127A7VMS2 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm11127A7VMS2 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm11127A7VMS2 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Gm11127A7VMS2 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Gm11127A7VMS2 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
Gm11127A7VMS2 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm11127A7VMS2 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Gm11127A7VMS2 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
Gm11127A7VMS2 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm11127A7VMS2 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
Gm11127A7VMS2 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Gm11127A7VMS2 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm11127A7VMS2 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Gm11127A7VMS2 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Gm11127A7VMS2 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm11127A7VMS2 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm11127A7VMS2 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Gm11127A7VMS2 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm11127A7VMS2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm11127A7VMS2 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.07■□□□□ 0.16
Gm11127A7VMS2 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm11127A7VMS2 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Gm11127A7VMS2 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm11127A7VMS2 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm11127A7VMS2 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm11127A7VMS2 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm11127A7VMS2 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Gm11127A7VMS2 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Gm11127A7VMS2 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm11127A7VMS2 Smad6-203ENSMUST00000179458 273 ntBASIC16.07■□□□□ 0.16
Gm11127A7VMS2 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC16.07■□□□□ 0.16
Gm11127A7VMS2 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Gm11127A7VMS2 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm11127A7VMS2 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm11127A7VMS2 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm11127A7VMS2 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm11127A7VMS2 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm11127A7VMS2 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm11127A7VMS2 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm11127A7VMS2 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Gm11127A7VMS2 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm11127A7VMS2 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm11127A7VMS2 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm11127A7VMS2 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Gm11127A7VMS2 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
Gm11127A7VMS2 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm11127A7VMS2 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm11127A7VMS2 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm11127A7VMS2 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.06■□□□□ 0.16
Gm11127A7VMS2 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Gm11127A7VMS2 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm11127A7VMS2 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm11127A7VMS2 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Gm11127A7VMS2 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm11127A7VMS2 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Gm11127A7VMS2 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.06■□□□□ 0.16
Gm11127A7VMS2 Gm45417-201ENSMUST00000209533 758 ntBASIC16.06■□□□□ 0.16
Gm11127A7VMS2 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.06■□□□□ 0.16
Gm11127A7VMS2 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Gm11127A7VMS2 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm11127A7VMS2 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm11127A7VMS2 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Gm11127A7VMS2 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.06■□□□□ 0.16
Gm11127A7VMS2 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms