Protein–RNA interactions for Protein: A0A0U1RNF2

Lcmt1, Leucine carboxyl methyltransferase 1, mousemouse

Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lcmt1A0A0U1RNF2 Gm42569-201ENSMUST00000200539 472 ntBASIC20.21■□□□□ 0.83
Lcmt1A0A0U1RNF2 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lcmt1A0A0U1RNF2 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lcmt1A0A0U1RNF2 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Lcmt1A0A0U1RNF2 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Lcmt1A0A0U1RNF2 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Lcmt1A0A0U1RNF2 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lcmt1A0A0U1RNF2 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lcmt1A0A0U1RNF2 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Lcmt1A0A0U1RNF2 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
Lcmt1A0A0U1RNF2 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lcmt1A0A0U1RNF2 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lcmt1A0A0U1RNF2 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Lcmt1A0A0U1RNF2 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Lcmt1A0A0U1RNF2 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lcmt1A0A0U1RNF2 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lcmt1A0A0U1RNF2 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
Lcmt1A0A0U1RNF2 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lcmt1A0A0U1RNF2 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
Lcmt1A0A0U1RNF2 Nespas-201ENSMUST00000143738 1083 ntBASIC20.19■□□□□ 0.82
Lcmt1A0A0U1RNF2 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Lcmt1A0A0U1RNF2 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lcmt1A0A0U1RNF2 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lcmt1A0A0U1RNF2 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lcmt1A0A0U1RNF2 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lcmt1A0A0U1RNF2 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Lcmt1A0A0U1RNF2 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Lcmt1A0A0U1RNF2 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lcmt1A0A0U1RNF2 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lcmt1A0A0U1RNF2 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lcmt1A0A0U1RNF2 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lcmt1A0A0U1RNF2 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lcmt1A0A0U1RNF2 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lcmt1A0A0U1RNF2 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lcmt1A0A0U1RNF2 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Lcmt1A0A0U1RNF2 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.18■□□□□ 0.82
Lcmt1A0A0U1RNF2 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Lcmt1A0A0U1RNF2 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lcmt1A0A0U1RNF2 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lcmt1A0A0U1RNF2 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.18■□□□□ 0.82
Lcmt1A0A0U1RNF2 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lcmt1A0A0U1RNF2 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lcmt1A0A0U1RNF2 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lcmt1A0A0U1RNF2 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lcmt1A0A0U1RNF2 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.18■□□□□ 0.82
Lcmt1A0A0U1RNF2 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Lcmt1A0A0U1RNF2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lcmt1A0A0U1RNF2 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lcmt1A0A0U1RNF2 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Lcmt1A0A0U1RNF2 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Lcmt1A0A0U1RNF2 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lcmt1A0A0U1RNF2 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lcmt1A0A0U1RNF2 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lcmt1A0A0U1RNF2 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lcmt1A0A0U1RNF2 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lcmt1A0A0U1RNF2 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Lcmt1A0A0U1RNF2 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lcmt1A0A0U1RNF2 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Lcmt1A0A0U1RNF2 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Lcmt1A0A0U1RNF2 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lcmt1A0A0U1RNF2 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Lcmt1A0A0U1RNF2 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lcmt1A0A0U1RNF2 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lcmt1A0A0U1RNF2 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lcmt1A0A0U1RNF2 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lcmt1A0A0U1RNF2 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lcmt1A0A0U1RNF2 Gm7290-201ENSMUST00000104990 617 ntBASIC20.16■□□□□ 0.82
Lcmt1A0A0U1RNF2 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lcmt1A0A0U1RNF2 Gm12918-201ENSMUST00000120234 636 ntBASIC20.16■□□□□ 0.82
Lcmt1A0A0U1RNF2 Gm15710-201ENSMUST00000121821 636 ntBASIC20.16■□□□□ 0.82
Lcmt1A0A0U1RNF2 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lcmt1A0A0U1RNF2 Gm26571-201ENSMUST00000181399 666 ntBASIC20.16■□□□□ 0.82
Lcmt1A0A0U1RNF2 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.16■□□□□ 0.82
Lcmt1A0A0U1RNF2 Gm5075-201ENSMUST00000196916 622 ntBASIC20.16■□□□□ 0.82
Lcmt1A0A0U1RNF2 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.16■□□□□ 0.82
Lcmt1A0A0U1RNF2 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Lcmt1A0A0U1RNF2 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.16■□□□□ 0.82
Lcmt1A0A0U1RNF2 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.16■□□□□ 0.82
Lcmt1A0A0U1RNF2 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lcmt1A0A0U1RNF2 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lcmt1A0A0U1RNF2 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.16■□□□□ 0.82
Lcmt1A0A0U1RNF2 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lcmt1A0A0U1RNF2 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lcmt1A0A0U1RNF2 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.15■□□□□ 0.82
Lcmt1A0A0U1RNF2 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.15■□□□□ 0.82
Lcmt1A0A0U1RNF2 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Lcmt1A0A0U1RNF2 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.15■□□□□ 0.82
Lcmt1A0A0U1RNF2 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lcmt1A0A0U1RNF2 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lcmt1A0A0U1RNF2 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
Lcmt1A0A0U1RNF2 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lcmt1A0A0U1RNF2 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Lcmt1A0A0U1RNF2 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lcmt1A0A0U1RNF2 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lcmt1A0A0U1RNF2 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lcmt1A0A0U1RNF2 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.14■□□□□ 0.81
Lcmt1A0A0U1RNF2 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Lcmt1A0A0U1RNF2 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Lcmt1A0A0U1RNF2 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Lcmt1A0A0U1RNF2 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms