Protein–RNA interactions for Protein: A0A0A6YW39

Ighv16-1, Immunoglobulin heavy variable 16-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv16-1A0A0A6YW39 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ighv16-1A0A0A6YW39 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ighv16-1A0A0A6YW39 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.82■□□□□ 0.28
Ighv16-1A0A0A6YW39 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.82■□□□□ 0.28
Ighv16-1A0A0A6YW39 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ighv16-1A0A0A6YW39 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ighv16-1A0A0A6YW39 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ighv16-1A0A0A6YW39 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ighv16-1A0A0A6YW39 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ighv16-1A0A0A6YW39 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv16-1A0A0A6YW39 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv16-1A0A0A6YW39 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv16-1A0A0A6YW39 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv16-1A0A0A6YW39 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.81■□□□□ 0.28
Ighv16-1A0A0A6YW39 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv16-1A0A0A6YW39 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv16-1A0A0A6YW39 Gm22325-201ENSMUST00000158904 308 ntBASIC16.81■□□□□ 0.28
Ighv16-1A0A0A6YW39 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Ighv16-1A0A0A6YW39 Gm44549-201ENSMUST00000208351 577 ntBASIC16.81■□□□□ 0.28
Ighv16-1A0A0A6YW39 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv16-1A0A0A6YW39 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.81■□□□□ 0.28
Ighv16-1A0A0A6YW39 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Ighv16-1A0A0A6YW39 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv16-1A0A0A6YW39 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv16-1A0A0A6YW39 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv16-1A0A0A6YW39 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv16-1A0A0A6YW39 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv16-1A0A0A6YW39 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv16-1A0A0A6YW39 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv16-1A0A0A6YW39 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv16-1A0A0A6YW39 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Ighv16-1A0A0A6YW39 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ighv16-1A0A0A6YW39 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ighv16-1A0A0A6YW39 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ighv16-1A0A0A6YW39 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ighv16-1A0A0A6YW39 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ighv16-1A0A0A6YW39 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Ighv16-1A0A0A6YW39 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ighv16-1A0A0A6YW39 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ighv16-1A0A0A6YW39 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Ighv16-1A0A0A6YW39 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ighv16-1A0A0A6YW39 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ighv16-1A0A0A6YW39 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.8■□□□□ 0.28
Ighv16-1A0A0A6YW39 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.8■□□□□ 0.28
Ighv16-1A0A0A6YW39 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ighv16-1A0A0A6YW39 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ighv16-1A0A0A6YW39 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ighv16-1A0A0A6YW39 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ighv16-1A0A0A6YW39 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv16-1A0A0A6YW39 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv16-1A0A0A6YW39 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv16-1A0A0A6YW39 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv16-1A0A0A6YW39 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv16-1A0A0A6YW39 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Ighv16-1A0A0A6YW39 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv16-1A0A0A6YW39 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.79■□□□□ 0.28
Ighv16-1A0A0A6YW39 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv16-1A0A0A6YW39 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv16-1A0A0A6YW39 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv16-1A0A0A6YW39 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Ighv16-1A0A0A6YW39 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv16-1A0A0A6YW39 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv16-1A0A0A6YW39 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Ighv16-1A0A0A6YW39 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.78■□□□□ 0.28
Ighv16-1A0A0A6YW39 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv16-1A0A0A6YW39 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.78■□□□□ 0.28
Ighv16-1A0A0A6YW39 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Ighv16-1A0A0A6YW39 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv16-1A0A0A6YW39 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv16-1A0A0A6YW39 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv16-1A0A0A6YW39 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.78■□□□□ 0.28
Ighv16-1A0A0A6YW39 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv16-1A0A0A6YW39 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv16-1A0A0A6YW39 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.78■□□□□ 0.28
Ighv16-1A0A0A6YW39 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ighv16-1A0A0A6YW39 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ighv16-1A0A0A6YW39 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ighv16-1A0A0A6YW39 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ighv16-1A0A0A6YW39 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.77■□□□□ 0.28
Ighv16-1A0A0A6YW39 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ighv16-1A0A0A6YW39 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.77■□□□□ 0.28
Ighv16-1A0A0A6YW39 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ighv16-1A0A0A6YW39 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.77■□□□□ 0.28
Ighv16-1A0A0A6YW39 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ighv16-1A0A0A6YW39 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ighv16-1A0A0A6YW39 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ighv16-1A0A0A6YW39 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ighv16-1A0A0A6YW39 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.77■□□□□ 0.27
Ighv16-1A0A0A6YW39 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Ighv16-1A0A0A6YW39 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Ighv16-1A0A0A6YW39 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Ighv16-1A0A0A6YW39 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.77■□□□□ 0.27
Ighv16-1A0A0A6YW39 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ighv16-1A0A0A6YW39 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Ighv16-1A0A0A6YW39 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Ighv16-1A0A0A6YW39 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Ighv16-1A0A0A6YW39 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ighv16-1A0A0A6YW39 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Ighv16-1A0A0A6YW39 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.76■□□□□ 0.27
Ighv16-1A0A0A6YW39 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms