Protein–RNA interactions for Protein: A0A087WQA9

Scgb2b21, ABPBG21, mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scgb2b21A0A087WQA9 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scgb2b21A0A087WQA9 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scgb2b21A0A087WQA9 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scgb2b21A0A087WQA9 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scgb2b21A0A087WQA9 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Scgb2b21A0A087WQA9 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Scgb2b21A0A087WQA9 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Scgb2b21A0A087WQA9 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scgb2b21A0A087WQA9 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.18■□□□□ 0.5
Scgb2b21A0A087WQA9 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Scgb2b21A0A087WQA9 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scgb2b21A0A087WQA9 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.18■□□□□ 0.5
Scgb2b21A0A087WQA9 Gm7860-201ENSMUST00000121190 879 ntBASIC18.18■□□□□ 0.5
Scgb2b21A0A087WQA9 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Scgb2b21A0A087WQA9 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scgb2b21A0A087WQA9 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scgb2b21A0A087WQA9 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scgb2b21A0A087WQA9 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scgb2b21A0A087WQA9 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scgb2b21A0A087WQA9 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scgb2b21A0A087WQA9 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Scgb2b21A0A087WQA9 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scgb2b21A0A087WQA9 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Scgb2b21A0A087WQA9 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scgb2b21A0A087WQA9 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scgb2b21A0A087WQA9 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scgb2b21A0A087WQA9 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scgb2b21A0A087WQA9 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Scgb2b21A0A087WQA9 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scgb2b21A0A087WQA9 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Scgb2b21A0A087WQA9 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Scgb2b21A0A087WQA9 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scgb2b21A0A087WQA9 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scgb2b21A0A087WQA9 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Scgb2b21A0A087WQA9 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.17■□□□□ 0.5
Scgb2b21A0A087WQA9 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Scgb2b21A0A087WQA9 Gm27454-201ENSMUST00000185090 204 ntBASIC18.17■□□□□ 0.5
Scgb2b21A0A087WQA9 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.17■□□□□ 0.5
Scgb2b21A0A087WQA9 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Scgb2b21A0A087WQA9 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scgb2b21A0A087WQA9 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scgb2b21A0A087WQA9 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scgb2b21A0A087WQA9 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Scgb2b21A0A087WQA9 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scgb2b21A0A087WQA9 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scgb2b21A0A087WQA9 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Scgb2b21A0A087WQA9 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scgb2b21A0A087WQA9 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scgb2b21A0A087WQA9 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Scgb2b21A0A087WQA9 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scgb2b21A0A087WQA9 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Scgb2b21A0A087WQA9 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.16■□□□□ 0.5
Scgb2b21A0A087WQA9 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Scgb2b21A0A087WQA9 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scgb2b21A0A087WQA9 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.16■□□□□ 0.5
Scgb2b21A0A087WQA9 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scgb2b21A0A087WQA9 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scgb2b21A0A087WQA9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.16■□□□□ 0.5
Scgb2b21A0A087WQA9 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scgb2b21A0A087WQA9 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scgb2b21A0A087WQA9 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.16■□□□□ 0.5
Scgb2b21A0A087WQA9 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scgb2b21A0A087WQA9 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Scgb2b21A0A087WQA9 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Scgb2b21A0A087WQA9 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
Scgb2b21A0A087WQA9 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scgb2b21A0A087WQA9 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Scgb2b21A0A087WQA9 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.15■□□□□ 0.5
Scgb2b21A0A087WQA9 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scgb2b21A0A087WQA9 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Scgb2b21A0A087WQA9 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.15■□□□□ 0.5
Scgb2b21A0A087WQA9 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Scgb2b21A0A087WQA9 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scgb2b21A0A087WQA9 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scgb2b21A0A087WQA9 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scgb2b21A0A087WQA9 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scgb2b21A0A087WQA9 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scgb2b21A0A087WQA9 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Scgb2b21A0A087WQA9 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scgb2b21A0A087WQA9 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scgb2b21A0A087WQA9 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Scgb2b21A0A087WQA9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.14■□□□□ 0.5
Scgb2b21A0A087WQA9 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Scgb2b21A0A087WQA9 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Scgb2b21A0A087WQA9 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Scgb2b21A0A087WQA9 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scgb2b21A0A087WQA9 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scgb2b21A0A087WQA9 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scgb2b21A0A087WQA9 Gm8493-201ENSMUST00000196881 489 ntBASIC18.14■□□□□ 0.49
Scgb2b21A0A087WQA9 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.14■□□□□ 0.49
Scgb2b21A0A087WQA9 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scgb2b21A0A087WQA9 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scgb2b21A0A087WQA9 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scgb2b21A0A087WQA9 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.14■□□□□ 0.49
Scgb2b21A0A087WQA9 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Scgb2b21A0A087WQA9 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scgb2b21A0A087WQA9 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scgb2b21A0A087WQA9 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.13■□□□□ 0.49
Scgb2b21A0A087WQA9 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scgb2b21A0A087WQA9 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms