Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Trav6-7-dv9A0A075B639 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6-7-dv9A0A075B639 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.15■□□□□ 0.18
Trav6-7-dv9A0A075B639 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Trav6-7-dv9A0A075B639 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trav6-7-dv9A0A075B639 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6-7-dv9A0A075B639 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
Trav6-7-dv9A0A075B639 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6-7-dv9A0A075B639 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.15■□□□□ 0.18
Trav6-7-dv9A0A075B639 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6-7-dv9A0A075B639 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trav6-7-dv9A0A075B639 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.15■□□□□ 0.18
Trav6-7-dv9A0A075B639 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6-7-dv9A0A075B639 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6-7-dv9A0A075B639 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6-7-dv9A0A075B639 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6-7-dv9A0A075B639 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6-7-dv9A0A075B639 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.15■□□□□ 0.18
Trav6-7-dv9A0A075B639 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6-7-dv9A0A075B639 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.15■□□□□ 0.18
Trav6-7-dv9A0A075B639 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav6-7-dv9A0A075B639 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trav6-7-dv9A0A075B639 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.14■□□□□ 0.18
Trav6-7-dv9A0A075B639 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6-7-dv9A0A075B639 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6-7-dv9A0A075B639 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6-7-dv9A0A075B639 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Trav6-7-dv9A0A075B639 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6-7-dv9A0A075B639 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6-7-dv9A0A075B639 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Trav6-7-dv9A0A075B639 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Trav6-7-dv9A0A075B639 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6-7-dv9A0A075B639 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6-7-dv9A0A075B639 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6-7-dv9A0A075B639 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav6-7-dv9A0A075B639 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Trav6-7-dv9A0A075B639 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Trav6-7-dv9A0A075B639 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.14■□□□□ 0.17
Trav6-7-dv9A0A075B639 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.14■□□□□ 0.17
Trav6-7-dv9A0A075B639 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6-7-dv9A0A075B639 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6-7-dv9A0A075B639 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6-7-dv9A0A075B639 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.13■□□□□ 0.17
Trav6-7-dv9A0A075B639 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6-7-dv9A0A075B639 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6-7-dv9A0A075B639 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6-7-dv9A0A075B639 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.13■□□□□ 0.17
Trav6-7-dv9A0A075B639 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6-7-dv9A0A075B639 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.13■□□□□ 0.17
Trav6-7-dv9A0A075B639 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6-7-dv9A0A075B639 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6-7-dv9A0A075B639 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.13■□□□□ 0.17
Trav6-7-dv9A0A075B639 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trav6-7-dv9A0A075B639 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Trav6-7-dv9A0A075B639 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6-7-dv9A0A075B639 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6-7-dv9A0A075B639 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6-7-dv9A0A075B639 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6-7-dv9A0A075B639 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Trav6-7-dv9A0A075B639 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.12■□□□□ 0.17
Trav6-7-dv9A0A075B639 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Trav6-7-dv9A0A075B639 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Trav6-7-dv9A0A075B639 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6-7-dv9A0A075B639 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.12■□□□□ 0.17
Trav6-7-dv9A0A075B639 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Trav6-7-dv9A0A075B639 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6-7-dv9A0A075B639 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6-7-dv9A0A075B639 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.12■□□□□ 0.17
Trav6-7-dv9A0A075B639 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6-7-dv9A0A075B639 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6-7-dv9A0A075B639 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.12■□□□□ 0.17
Trav6-7-dv9A0A075B639 AV356131-201ENSMUST00000206201 750 ntBASIC16.12■□□□□ 0.17
Trav6-7-dv9A0A075B639 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
Trav6-7-dv9A0A075B639 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6-7-dv9A0A075B639 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trav6-7-dv9A0A075B639 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6-7-dv9A0A075B639 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6-7-dv9A0A075B639 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trav6-7-dv9A0A075B639 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6-7-dv9A0A075B639 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6-7-dv9A0A075B639 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Trav6-7-dv9A0A075B639 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6-7-dv9A0A075B639 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Trav6-7-dv9A0A075B639 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Trav6-7-dv9A0A075B639 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.11■□□□□ 0.17
Trav6-7-dv9A0A075B639 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.11■□□□□ 0.17
Trav6-7-dv9A0A075B639 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.11■□□□□ 0.17
Trav6-7-dv9A0A075B639 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.11■□□□□ 0.17
Trav6-7-dv9A0A075B639 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6-7-dv9A0A075B639 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6-7-dv9A0A075B639 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6-7-dv9A0A075B639 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Trav6-7-dv9A0A075B639 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6-7-dv9A0A075B639 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.1■□□□□ 0.17
Trav6-7-dv9A0A075B639 Tgds-204ENSMUST00000228543 1594 ntBASIC16.1■□□□□ 0.17
Trav6-7-dv9A0A075B639 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.1■□□□□ 0.17
Trav6-7-dv9A0A075B639 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.1■□□□□ 0.17
Trav6-7-dv9A0A075B639 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6-7-dv9A0A075B639 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Trav6-7-dv9A0A075B639 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms