Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 CT030645.2-201ENSMUST00000224321 1012 ntBASIC6.79□□□□□ -1.32
Hoxa9P09631 Gm22351-201ENSMUST00000083925 107 ntBASIC6.79□□□□□ -1.32
Hoxa9P09631 Gm24032-201ENSMUST00000083932 159 ntBASIC6.79□□□□□ -1.32
Hoxa9P09631 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Hoxa9P09631 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Hoxa9P09631 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Hoxa9P09631 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Hoxa9P09631 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC6.79□□□□□ -1.32
Hoxa9P09631 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Hoxa9P09631 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Hoxa9P09631 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
Hoxa9P09631 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Hoxa9P09631 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Hoxa9P09631 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Hoxa9P09631 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Hoxa9P09631 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Hoxa9P09631 Gm31049-201ENSMUST00000201516 1302 ntBASIC6.78□□□□□ -1.32
Hoxa9P09631 Gm42885-201ENSMUST00000200763 4214 ntBASIC6.78□□□□□ -1.32
Hoxa9P09631 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxa9P09631 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxa9P09631 Gm37289-201ENSMUST00000195409 1402 ntBASIC6.78□□□□□ -1.32
Hoxa9P09631 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxa9P09631 Malat1-201ENSMUST00000172812 6983 ntBASIC6.78□□□□□ -1.32
Hoxa9P09631 Gm38156-201ENSMUST00000194601 2260 ntBASIC6.78□□□□□ -1.32
Hoxa9P09631 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC6.78□□□□□ -1.32
Hoxa9P09631 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxa9P09631 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxa9P09631 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
Hoxa9P09631 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Hoxa9P09631 Gm7658-201ENSMUST00000119064 1124 ntBASIC6.78□□□□□ -1.32
Hoxa9P09631 Gm12447-201ENSMUST00000119110 470 ntBASIC6.78□□□□□ -1.32
Hoxa9P09631 Gm2986-201ENSMUST00000121603 382 ntBASIC6.78□□□□□ -1.32
Hoxa9P09631 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxa9P09631 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxa9P09631 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC6.78□□□□□ -1.32
Hoxa9P09631 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC6.78□□□□□ -1.32
Hoxa9P09631 Gm25722-201ENSMUST00000157498 279 ntBASIC6.78□□□□□ -1.32
Hoxa9P09631 Gm23903-201ENSMUST00000157566 131 ntBASIC6.78□□□□□ -1.32
Hoxa9P09631 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Hoxa9P09631 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxa9P09631 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxa9P09631 Gm4904-201ENSMUST00000178243 1195 ntBASIC6.78□□□□□ -1.32
Hoxa9P09631 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Hoxa9P09631 Gm26570-201ENSMUST00000180672 342 ntBASIC6.78□□□□□ -1.32
Hoxa9P09631 Gm8183-201ENSMUST00000183134 980 ntBASIC6.78□□□□□ -1.32
Hoxa9P09631 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC6.78□□□□□ -1.32
Hoxa9P09631 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxa9P09631 AL713985.1-201ENSMUST00000219030 420 ntBASIC6.78□□□□□ -1.32
Hoxa9P09631 AC073562.1-201ENSMUST00000222117 401 ntBASIC6.78□□□□□ -1.32
Hoxa9P09631 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Hoxa9P09631 Gm26130-201ENSMUST00000083171 138 ntBASIC6.78□□□□□ -1.32
Hoxa9P09631 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxa9P09631 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Hoxa9P09631 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxa9P09631 Gm3555-201ENSMUST00000160287 1395 ntBASIC6.78□□□□□ -1.32
Hoxa9P09631 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxa9P09631 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxa9P09631 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxa9P09631 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxa9P09631 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
Hoxa9P09631 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxa9P09631 Gm37525-201ENSMUST00000193499 2871 ntBASIC6.78□□□□□ -1.32
Hoxa9P09631 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC6.78□□□□□ -1.32
Hoxa9P09631 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxa9P09631 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Hoxa9P09631 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
Hoxa9P09631 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Hoxa9P09631 AC122346.1-201ENSMUST00000225266 3732 ntBASIC6.77□□□□□ -1.33
Hoxa9P09631 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC6.77□□□□□ -1.33
Hoxa9P09631 Gm45516-201ENSMUST00000211588 4182 ntBASIC6.77□□□□□ -1.33
Hoxa9P09631 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Hoxa9P09631 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Hoxa9P09631 Gm44676-201ENSMUST00000208520 3055 ntBASIC6.77□□□□□ -1.33
Hoxa9P09631 Gm24272-201ENSMUST00000102329 98 ntBASIC6.77□□□□□ -1.33
Hoxa9P09631 Gm24888-201ENSMUST00000104387 130 ntBASIC6.77□□□□□ -1.33
Hoxa9P09631 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC6.77□□□□□ -1.33
Hoxa9P09631 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC6.77□□□□□ -1.33
Hoxa9P09631 Gm15048-201ENSMUST00000118201 954 ntBASIC6.77□□□□□ -1.33
Hoxa9P09631 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Hoxa9P09631 Gm9506-201ENSMUST00000118516 320 ntBASIC6.77□□□□□ -1.33
Hoxa9P09631 Gm15750-201ENSMUST00000120970 616 ntBASIC6.77□□□□□ -1.33
Hoxa9P09631 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Hoxa9P09631 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC6.77□□□□□ -1.33
Hoxa9P09631 Gm18006-201ENSMUST00000177411 662 ntBASIC6.77□□□□□ -1.33
Hoxa9P09631 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC6.77□□□□□ -1.33
Hoxa9P09631 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Hoxa9P09631 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC6.77□□□□□ -1.33
Hoxa9P09631 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC6.77□□□□□ -1.33
Hoxa9P09631 Gm27152-201ENSMUST00000183828 99 ntBASIC6.77□□□□□ -1.33
Hoxa9P09631 Gm27602-201ENSMUST00000183861 111 ntBASIC6.77□□□□□ -1.33
Hoxa9P09631 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Hoxa9P09631 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Hoxa9P09631 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC6.77□□□□□ -1.33
Hoxa9P09631 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
Hoxa9P09631 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC6.77□□□□□ -1.33
Hoxa9P09631 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC6.77□□□□□ -1.33
Hoxa9P09631 Gm44538-201ENSMUST00000205615 348 ntBASIC6.77□□□□□ -1.33
Hoxa9P09631 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC6.77□□□□□ -1.33
Hoxa9P09631 AC132833.4-201ENSMUST00000228313 203 ntBASIC6.77□□□□□ -1.33
Hoxa9P09631 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms