Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Ddx47-201ENSMUST00000032326 1764 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Foxc1Q61572 Xndc1-202ENSMUST00000106950 3131 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Foxc1Q61572 AC123842.1-201ENSMUST00000217622 3118 ntTSL 5 BASIC6.3□□□□□ -1.4
Foxc1Q61572 Map3k7-204ENSMUST00000108184 5491 ntTSL 5 BASIC6.3□□□□□ -1.4
Foxc1Q61572 Eif2ak4-204ENSMUST00000110870 5116 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Foxc1Q61572 Dlc1-206ENSMUST00000163663 5113 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Foxc1Q61572 3110035E14Rik-201ENSMUST00000088666 3256 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Foxc1Q61572 Tbata-204ENSMUST00000122261 1431 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Foxc1Q61572 Gm8127-201ENSMUST00000163655 1427 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Foxc1Q61572 Gm8138-201ENSMUST00000169473 1404 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Foxc1Q61572 Ankrd27-201ENSMUST00000040844 4284 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Foxc1Q61572 Rnase13-201ENSMUST00000089771 1412 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Foxc1Q61572 St3gal6-201ENSMUST00000114357 1918 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Foxc1Q61572 Ambn-202ENSMUST00000198265 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Foxc1Q61572 Foxn1-201ENSMUST00000108294 3214 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Foxc1Q61572 Tdrd5-204ENSMUST00000167528 3210 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Foxc1Q61572 Nos1-207ENSMUST00000171055 4388 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Foxc1Q61572 Pou2f1-216ENSMUST00000184643 2201 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Foxc1Q61572 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Foxc1Q61572 Gm46339-201ENSMUST00000222720 3539 ntBASIC6.3□□□□□ -1.4
Foxc1Q61572 Rrp12-201ENSMUST00000038677 4319 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Foxc1Q61572 Gm43154-206ENSMUST00000209562 1884 ntTSL 5 BASIC6.3□□□□□ -1.4
Foxc1Q61572 Dnajc11-201ENSMUST00000062904 3151 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Foxc1Q61572 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Foxc1Q61572 Vmn1r44-213ENSMUST00000228700 2004 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Foxc1Q61572 Asns-201ENSMUST00000031766 2001 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Foxc1Q61572 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC6.3□□□□□ -1.4
Foxc1Q61572 Cep295-203ENSMUST00000098979 7188 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
Foxc1Q61572 4933406L23Rik-201ENSMUST00000203567 1509 ntBASIC6.3□□□□□ -1.4
Foxc1Q61572 Serpinb6a-202ENSMUST00000043552 1547 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Foxc1Q61572 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC6.3□□□□□ -1.4
Foxc1Q61572 Rnf6-208ENSMUST00000169407 3276 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
Foxc1Q61572 AC171003.1-201ENSMUST00000221667 1665 ntBASIC6.3□□□□□ -1.4
Foxc1Q61572 Lingo2-202ENSMUST00000098151 2781 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Foxc1Q61572 CT009530.1-201ENSMUST00000227348 2927 ntBASIC6.29□□□□□ -1.4
Foxc1Q61572 Vmn1r51-208ENSMUST00000227876 4160 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Foxc1Q61572 Gm37198-201ENSMUST00000195593 2110 ntBASIC6.29□□□□□ -1.4
Foxc1Q61572 Arfgef1-201ENSMUST00000088615 6978 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Foxc1Q61572 G630018N14Rik-203ENSMUST00000221171 5888 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Foxc1Q61572 Gdnf-201ENSMUST00000022744 3509 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Foxc1Q61572 Gm4927-201ENSMUST00000219548 1318 ntBASIC6.29□□□□□ -1.4
Foxc1Q61572 Bdnf-210ENSMUST00000111051 4125 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Foxc1Q61572 Pde7b-201ENSMUST00000020165 4137 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
Foxc1Q61572 Tmprss11g-201ENSMUST00000134179 2873 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Foxc1Q61572 Gm5402-201ENSMUST00000119588 1618 ntBASIC6.29□□□□□ -1.4
Foxc1Q61572 Tifab-201ENSMUST00000169652 3349 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Foxc1Q61572 Tmem100-201ENSMUST00000092788 1767 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Foxc1Q61572 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Foxc1Q61572 Fam198a-201ENSMUST00000043011 3623 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Foxc1Q61572 Fam214a-201ENSMUST00000081746 3795 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
Foxc1Q61572 Gfral-201ENSMUST00000074880 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Foxc1Q61572 Rian-202ENSMUST00000181253 2355 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Foxc1Q61572 Pgm2-202ENSMUST00000102783 2523 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Foxc1Q61572 Synj2-205ENSMUST00000115786 2531 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Foxc1Q61572 Zfp827-201ENSMUST00000087927 2801 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Foxc1Q61572 Msh4-205ENSMUST00000190449 3110 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Foxc1Q61572 Slfn4-202ENSMUST00000167596 3703 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Foxc1Q61572 Prkrip1-204ENSMUST00000151786 3893 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Foxc1Q61572 Sh2d2a-201ENSMUST00000029709 4484 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
Foxc1Q61572 Oprm1-217ENSMUST00000105615 1258 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Foxc1Q61572 S100a16-204ENSMUST00000107333 608 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
Foxc1Q61572 Ppp2r5c-202ENSMUST00000109832 4108 ntTSL 2 BASIC6.29□□□□□ -1.4
Foxc1Q61572 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Foxc1Q61572 Eif2s3x-202ENSMUST00000113922 1103 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Foxc1Q61572 Gm14648-201ENSMUST00000119328 483 ntBASIC6.29□□□□□ -1.4
Foxc1Q61572 Gm11625-201ENSMUST00000119535 296 ntBASIC6.29□□□□□ -1.4
Foxc1Q61572 Gm12275-201ENSMUST00000119805 307 ntBASIC6.29□□□□□ -1.4
Foxc1Q61572 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC6.29□□□□□ -1.4
Foxc1Q61572 Gm6591-201ENSMUST00000121063 434 ntBASIC6.29□□□□□ -1.4
Foxc1Q61572 Gm12970-201ENSMUST00000134911 581 ntTSL 3 BASIC6.29□□□□□ -1.4
Foxc1Q61572 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC6.29□□□□□ -1.4
Foxc1Q61572 Gm15879-201ENSMUST00000139334 809 ntTSL 5 BASIC6.29□□□□□ -1.4
Foxc1Q61572 4933406J10Rik-201ENSMUST00000144828 963 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Foxc1Q61572 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC6.29□□□□□ -1.4
Foxc1Q61572 Gm22484-201ENSMUST00000157992 306 ntBASIC6.29□□□□□ -1.4
Foxc1Q61572 Tro-207ENSMUST00000163969 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Foxc1Q61572 Vmn2r55-202ENSMUST00000172743 2346 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Foxc1Q61572 Sag-209ENSMUST00000177757 1584 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Foxc1Q61572 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Foxc1Q61572 Gm23619-201ENSMUST00000178411 94 ntBASIC6.29□□□□□ -1.4
Foxc1Q61572 Gm25474-201ENSMUST00000179052 94 ntBASIC6.29□□□□□ -1.4
Foxc1Q61572 Gm22047-201ENSMUST00000179176 94 ntBASIC6.29□□□□□ -1.4
Foxc1Q61572 Gm29556-201ENSMUST00000187591 696 ntBASIC6.29□□□□□ -1.4
Foxc1Q61572 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC6.29□□□□□ -1.4
Foxc1Q61572 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC6.29□□□□□ -1.4
Foxc1Q61572 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC6.29□□□□□ -1.4
Foxc1Q61572 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Foxc1Q61572 Trav5d-2-201ENSMUST00000196107 275 ntBASIC6.29□□□□□ -1.4
Foxc1Q61572 Gm44373-201ENSMUST00000196112 169 ntBASIC6.29□□□□□ -1.4
Foxc1Q61572 Trav5n-2-201ENSMUST00000197136 275 ntBASIC6.29□□□□□ -1.4
Foxc1Q61572 Gm43519-201ENSMUST00000197239 1872 ntBASIC6.29□□□□□ -1.4
Foxc1Q61572 Gm43655-201ENSMUST00000197367 222 ntBASIC6.29□□□□□ -1.4
Foxc1Q61572 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Foxc1Q61572 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC6.29□□□□□ -1.4
Foxc1Q61572 Gm2939-201ENSMUST00000198496 478 ntBASIC6.29□□□□□ -1.4
Foxc1Q61572 Gm40117-201ENSMUST00000198827 369 ntTSL 3 BASIC6.29□□□□□ -1.4
Foxc1Q61572 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC6.29□□□□□ -1.4
Foxc1Q61572 Gm44055-201ENSMUST00000204376 247 ntBASIC6.29□□□□□ -1.4
Foxc1Q61572 Gm44763-201ENSMUST00000208287 2019 ntBASIC6.29□□□□□ -1.4
Foxc1Q61572 Gm35501-201ENSMUST00000213492 783 ntTSL 2 BASIC6.29□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms