Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Col2a1P28481 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC7.5□□□□□ -1.21
Col2a1P28481 Gm45073-201ENSMUST00000207688 4247 ntBASIC7.5□□□□□ -1.21
Col2a1P28481 Uvssa-204ENSMUST00000202816 7165 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Col2a1P28481 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Col2a1P28481 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC7.5□□□□□ -1.21
Col2a1P28481 Zfp407-202ENSMUST00000125763 7906 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Col2a1P28481 Ptpn13-201ENSMUST00000048957 7915 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
Col2a1P28481 C79798-201ENSMUST00000131588 1793 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Col2a1P28481 Gm6101-201ENSMUST00000195384 1867 ntBASIC7.5□□□□□ -1.21
Col2a1P28481 Gm37725-201ENSMUST00000193965 2125 ntBASIC7.5□□□□□ -1.21
Col2a1P28481 Srpk2-201ENSMUST00000088392 6491 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Col2a1P28481 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC7.5□□□□□ -1.21
Col2a1P28481 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Col2a1P28481 Tbc1d5-201ENSMUST00000024717 5435 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Col2a1P28481 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Col2a1P28481 Gm21846-201ENSMUST00000179257 3073 ntBASIC7.5□□□□□ -1.21
Col2a1P28481 Fbxw7-202ENSMUST00000107675 3599 ntAPPRIS ALT1 TSL 5 BASIC7.5□□□□□ -1.21
Col2a1P28481 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Col2a1P28481 Mir708-201ENSMUST00000102189 109 ntBASIC7.49□□□□□ -1.21
Col2a1P28481 Gm24989-201ENSMUST00000104461 88 ntBASIC7.49□□□□□ -1.21
Col2a1P28481 Gm13835-201ENSMUST00000118459 685 ntBASIC7.49□□□□□ -1.21
Col2a1P28481 Gm11902-201ENSMUST00000118849 270 ntBASIC7.49□□□□□ -1.21
Col2a1P28481 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC7.49□□□□□ -1.21
Col2a1P28481 Mgat4a-205ENSMUST00000151952 7251 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Col2a1P28481 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC7.49□□□□□ -1.21
Col2a1P28481 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC7.49□□□□□ -1.21
Col2a1P28481 Gm24687-201ENSMUST00000157758 241 ntBASIC7.49□□□□□ -1.21
Col2a1P28481 Gm22701-201ENSMUST00000175371 291 ntBASIC7.49□□□□□ -1.21
Col2a1P28481 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Col2a1P28481 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC7.49□□□□□ -1.21
Col2a1P28481 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC7.49□□□□□ -1.21
Col2a1P28481 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC7.49□□□□□ -1.21
Col2a1P28481 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC7.49□□□□□ -1.21
Col2a1P28481 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Col2a1P28481 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Col2a1P28481 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Col2a1P28481 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Col2a1P28481 Gm6150-202ENSMUST00000219888 2977 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Col2a1P28481 AC122251.2-201ENSMUST00000227341 603 ntBASIC7.49□□□□□ -1.21
Col2a1P28481 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Col2a1P28481 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Col2a1P28481 AC126549.1-201ENSMUST00000225044 3687 ntBASIC7.49□□□□□ -1.21
Col2a1P28481 Gm37653-201ENSMUST00000195401 3578 ntBASIC7.49□□□□□ -1.21
Col2a1P28481 Sipa1l1-208ENSMUST00000222298 6179 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Col2a1P28481 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Col2a1P28481 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Col2a1P28481 Gm42744-201ENSMUST00000196517 2147 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Col2a1P28481 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Col2a1P28481 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Col2a1P28481 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC7.49□□□□□ -1.21
Col2a1P28481 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Col2a1P28481 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Col2a1P28481 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Col2a1P28481 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC7.49□□□□□ -1.21
Col2a1P28481 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Col2a1P28481 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Col2a1P28481 Gm12643-201ENSMUST00000116078 374 ntBASIC7.49□□□□□ -1.21
Col2a1P28481 Gm13626-201ENSMUST00000119435 402 ntBASIC7.49□□□□□ -1.21
Col2a1P28481 Gm16511-201ENSMUST00000120019 564 ntBASIC7.49□□□□□ -1.21
Col2a1P28481 Gm14695-201ENSMUST00000121721 282 ntBASIC7.49□□□□□ -1.21
Col2a1P28481 Gm26346-201ENSMUST00000157525 329 ntBASIC7.49□□□□□ -1.21
Col2a1P28481 Gm22094-201ENSMUST00000158976 117 ntBASIC7.49□□□□□ -1.21
Col2a1P28481 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC7.49□□□□□ -1.21
Col2a1P28481 Gm23450-201ENSMUST00000178285 91 ntBASIC7.49□□□□□ -1.21
Col2a1P28481 Gm20778-201ENSMUST00000178524 627 ntBASIC7.49□□□□□ -1.21
Col2a1P28481 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC7.49□□□□□ -1.21
Col2a1P28481 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Col2a1P28481 Gm3351-201ENSMUST00000193454 505 ntBASIC7.49□□□□□ -1.21
Col2a1P28481 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC7.49□□□□□ -1.21
Col2a1P28481 Gm7663-201ENSMUST00000201151 1240 ntBASIC7.49□□□□□ -1.21
Col2a1P28481 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC7.49□□□□□ -1.21
Col2a1P28481 Gm18851-201ENSMUST00000210087 1058 ntBASIC7.49□□□□□ -1.21
Col2a1P28481 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC7.49□□□□□ -1.21
Col2a1P28481 AV026068-216ENSMUST00000223874 328 ntBASIC7.49□□□□□ -1.21
Col2a1P28481 AV026068-218ENSMUST00000223980 575 ntBASIC7.49□□□□□ -1.21
Col2a1P28481 Plch1-208ENSMUST00000160638 6271 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
Col2a1P28481 AL450321.1-201ENSMUST00000220600 3550 ntBASIC7.49□□□□□ -1.21
Col2a1P28481 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Col2a1P28481 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC7.48□□□□□ -1.21
Col2a1P28481 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
Col2a1P28481 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
Col2a1P28481 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Col2a1P28481 Ect2l-204ENSMUST00000208948 2862 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
Col2a1P28481 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC7.48□□□□□ -1.21
Col2a1P28481 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Col2a1P28481 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
Col2a1P28481 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Col2a1P28481 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Col2a1P28481 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Col2a1P28481 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Col2a1P28481 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Col2a1P28481 Unc79-208ENSMUST00000179002 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Col2a1P28481 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Col2a1P28481 Gm43606-201ENSMUST00000195938 3556 ntBASIC7.48□□□□□ -1.21
Col2a1P28481 Wdfy3-201ENSMUST00000053177 14274 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Col2a1P28481 Ttk-202ENSMUST00000185913 2731 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Col2a1P28481 Pdlim5-205ENSMUST00000170361 2010 ntTSL 5 BASIC7.48□□□□□ -1.21
Col2a1P28481 Map3k13-201ENSMUST00000042065 6709 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Col2a1P28481 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms