Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Usp47Q8BY87 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
Usp47Q8BY87 Zzz3-203ENSMUST00000106101 7539 ntAPPRIS P3 TSL 5 BASIC9.32□□□□□ -0.92
Usp47Q8BY87 Gm43187-201ENSMUST00000200652 2397 ntBASIC9.32□□□□□ -0.92
Usp47Q8BY87 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Usp47Q8BY87 Zmynd11-205ENSMUST00000110636 4117 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Usp47Q8BY87 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Usp47Q8BY87 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Usp47Q8BY87 Gm6181-201ENSMUST00000117187 264 ntBASIC9.32□□□□□ -0.92
Usp47Q8BY87 M6pr-ps-201ENSMUST00000120481 830 ntBASIC9.32□□□□□ -0.92
Usp47Q8BY87 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC9.32□□□□□ -0.92
Usp47Q8BY87 Gm23430-201ENSMUST00000122490 314 ntBASIC9.32□□□□□ -0.92
Usp47Q8BY87 Gm24383-201ENSMUST00000122691 333 ntBASIC9.32□□□□□ -0.92
Usp47Q8BY87 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Usp47Q8BY87 Gm25904-201ENSMUST00000158491 143 ntBASIC9.32□□□□□ -0.92
Usp47Q8BY87 Gm28428-201ENSMUST00000188886 697 ntBASIC9.32□□□□□ -0.92
Usp47Q8BY87 Gm19087-201ENSMUST00000191430 946 ntBASIC9.32□□□□□ -0.92
Usp47Q8BY87 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC9.32□□□□□ -0.92
Usp47Q8BY87 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC9.32□□□□□ -0.92
Usp47Q8BY87 Olfr65-202ENSMUST00000209528 1106 ntAPPRIS P2 BASIC9.32□□□□□ -0.92
Usp47Q8BY87 AC157085.1-201ENSMUST00000216343 162 ntBASIC9.32□□□□□ -0.92
Usp47Q8BY87 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC9.32□□□□□ -0.92
Usp47Q8BY87 AC134917.2-201ENSMUST00000223354 124 ntBASIC9.32□□□□□ -0.92
Usp47Q8BY87 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Usp47Q8BY87 Olfr930-201ENSMUST00000058789 1101 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Usp47Q8BY87 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Usp47Q8BY87 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Usp47Q8BY87 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Usp47Q8BY87 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Usp47Q8BY87 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Usp47Q8BY87 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Usp47Q8BY87 Gm7337-202ENSMUST00000181439 2655 ntBASIC9.32□□□□□ -0.92
Usp47Q8BY87 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Usp47Q8BY87 AC139941.2-201ENSMUST00000221565 1824 ntBASIC9.32□□□□□ -0.92
Usp47Q8BY87 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC9.32□□□□□ -0.92
Usp47Q8BY87 Gm6150-202ENSMUST00000219888 2977 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Usp47Q8BY87 Trim66-202ENSMUST00000106739 9250 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Usp47Q8BY87 Gm33167-201ENSMUST00000201933 2643 ntBASIC9.31□□□□□ -0.92
Usp47Q8BY87 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC9.31□□□□□ -0.92
Usp47Q8BY87 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC9.31□□□□□ -0.92
Usp47Q8BY87 Gm42885-201ENSMUST00000200763 4214 ntBASIC9.31□□□□□ -0.92
Usp47Q8BY87 Gm1965-202ENSMUST00000161362 2405 ntTSL 2 BASIC9.31□□□□□ -0.92
Usp47Q8BY87 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Usp47Q8BY87 Agl-208ENSMUST00000162792 6978 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
Usp47Q8BY87 Gm24069-201ENSMUST00000104512 127 ntBASIC9.31□□□□□ -0.92
Usp47Q8BY87 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Usp47Q8BY87 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC9.31□□□□□ -0.92
Usp47Q8BY87 Gm18833-201ENSMUST00000173218 862 ntBASIC9.31□□□□□ -0.92
Usp47Q8BY87 Gm6074-201ENSMUST00000193340 451 ntBASIC9.31□□□□□ -0.92
Usp47Q8BY87 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC9.31□□□□□ -0.92
Usp47Q8BY87 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC9.31□□□□□ -0.92
Usp47Q8BY87 Gm43762-201ENSMUST00000201521 295 ntBASIC9.31□□□□□ -0.92
Usp47Q8BY87 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC9.31□□□□□ -0.92
Usp47Q8BY87 Gm2225-201ENSMUST00000209570 377 ntBASIC9.31□□□□□ -0.92
Usp47Q8BY87 Gm46364-201ENSMUST00000218548 319 ntBASIC9.31□□□□□ -0.92
Usp47Q8BY87 CT025667.1-201ENSMUST00000225872 382 ntBASIC9.31□□□□□ -0.92
Usp47Q8BY87 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Usp47Q8BY87 Olfr140-203ENSMUST00000216475 3574 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Usp47Q8BY87 Srek1ip1-201ENSMUST00000022230 2365 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usp47Q8BY87 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usp47Q8BY87 Olfr374-202ENSMUST00000210435 8718 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
Usp47Q8BY87 Ccdc141-202ENSMUST00000049544 8969 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Usp47Q8BY87 Pdlim5-205ENSMUST00000170361 2010 ntTSL 5 BASIC9.31□□□□□ -0.92
Usp47Q8BY87 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usp47Q8BY87 Gm18194-202ENSMUST00000210952 3442 ntBASIC9.31□□□□□ -0.92
Usp47Q8BY87 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Usp47Q8BY87 Muc5ac-202ENSMUST00000155534 10752 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Usp47Q8BY87 Nlrc5-201ENSMUST00000053085 6945 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Usp47Q8BY87 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Usp47Q8BY87 Nwd1-209ENSMUST00000228312 10789 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Usp47Q8BY87 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Usp47Q8BY87 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Usp47Q8BY87 Gm15765-201ENSMUST00000118407 910 ntBASIC9.3□□□□□ -0.92
Usp47Q8BY87 Gm7212-201ENSMUST00000120817 348 ntBASIC9.3□□□□□ -0.92
Usp47Q8BY87 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC9.3□□□□□ -0.92
Usp47Q8BY87 Gm25342-201ENSMUST00000157459 122 ntBASIC9.3□□□□□ -0.92
Usp47Q8BY87 Mir5107-201ENSMUST00000175586 88 ntBASIC9.3□□□□□ -0.92
Usp47Q8BY87 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Usp47Q8BY87 Gm25244-201ENSMUST00000178089 132 ntBASIC9.3□□□□□ -0.92
Usp47Q8BY87 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Usp47Q8BY87 Gm10410-201ENSMUST00000180138 384 ntBASIC9.3□□□□□ -0.92
Usp47Q8BY87 Gm26898-201ENSMUST00000181678 384 ntBASIC9.3□□□□□ -0.92
Usp47Q8BY87 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Usp47Q8BY87 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC9.3□□□□□ -0.92
Usp47Q8BY87 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Usp47Q8BY87 AC154431.2-201ENSMUST00000225215 1055 ntBASIC9.3□□□□□ -0.92
Usp47Q8BY87 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Usp47Q8BY87 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Usp47Q8BY87 Gm18313-201ENSMUST00000221036 1784 ntBASIC9.3□□□□□ -0.92
Usp47Q8BY87 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC9.3□□□□□ -0.92
Usp47Q8BY87 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC9.3□□□□□ -0.92
Usp47Q8BY87 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC9.3□□□□□ -0.92
Usp47Q8BY87 Gm37274-201ENSMUST00000192167 1682 ntBASIC9.3□□□□□ -0.92
Usp47Q8BY87 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Usp47Q8BY87 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Usp47Q8BY87 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC9.29□□□□□ -0.92
Usp47Q8BY87 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Usp47Q8BY87 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Usp47Q8BY87 Gm37234-201ENSMUST00000193259 1441 ntBASIC9.29□□□□□ -0.92
Usp47Q8BY87 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC9.29□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms