Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm23891-201ENSMUST00000158114 138 ntBASIC6.41□□□□□ -1.38
Cdx2P43241 Gm26169-201ENSMUST00000158420 135 ntBASIC6.41□□□□□ -1.38
Cdx2P43241 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC6.41□□□□□ -1.38
Cdx2P43241 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cdx2P43241 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Cdx2P43241 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC6.41□□□□□ -1.38
Cdx2P43241 Gm18447-201ENSMUST00000187501 307 ntBASIC6.41□□□□□ -1.38
Cdx2P43241 Ighv1-10-201ENSMUST00000194372 355 ntBASIC6.41□□□□□ -1.38
Cdx2P43241 Gm44823-201ENSMUST00000204775 1107 ntBASIC6.41□□□□□ -1.38
Cdx2P43241 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC6.41□□□□□ -1.38
Cdx2P43241 Gm46364-201ENSMUST00000218548 319 ntBASIC6.41□□□□□ -1.38
Cdx2P43241 Gm9231-201ENSMUST00000220817 1009 ntBASIC6.41□□□□□ -1.38
Cdx2P43241 Gm3800-201ENSMUST00000221086 554 ntBASIC6.41□□□□□ -1.38
Cdx2P43241 AC105407.1-201ENSMUST00000225684 614 ntBASIC6.41□□□□□ -1.38
Cdx2P43241 Olfr735-201ENSMUST00000049729 1065 ntAPPRIS P2 BASIC6.41□□□□□ -1.38
Cdx2P43241 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Cdx2P43241 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Cdx2P43241 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Cdx2P43241 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Cdx2P43241 CT025535.2-201ENSMUST00000228572 7441 ntBASIC6.41□□□□□ -1.38
Cdx2P43241 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC6.41□□□□□ -1.38
Cdx2P43241 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cdx2P43241 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Cdx2P43241 Sestd1-202ENSMUST00000102660 8990 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Cdx2P43241 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cdx2P43241 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC6.41□□□□□ -1.38
Cdx2P43241 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Cdx2P43241 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC6.41□□□□□ -1.38
Cdx2P43241 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Cdx2P43241 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cdx2P43241 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Cdx2P43241 Cenpc1-201ENSMUST00000031170 3192 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cdx2P43241 CT010577.1-202ENSMUST00000226187 1903 ntBASIC6.4□□□□□ -1.38
Cdx2P43241 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Cdx2P43241 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Cdx2P43241 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Cdx2P43241 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC6.4□□□□□ -1.38
Cdx2P43241 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.38
Cdx2P43241 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Cdx2P43241 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Cdx2P43241 Gm28231-201ENSMUST00000190118 2599 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Cdx2P43241 Gm43398-201ENSMUST00000196584 2742 ntBASIC6.4□□□□□ -1.38
Cdx2P43241 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Cdx2P43241 Gm26422-201ENSMUST00000104276 132 ntBASIC6.4□□□□□ -1.38
Cdx2P43241 Gm4342-201ENSMUST00000118982 367 ntBASIC6.4□□□□□ -1.38
Cdx2P43241 Gm12447-201ENSMUST00000119110 470 ntBASIC6.4□□□□□ -1.38
Cdx2P43241 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC6.4□□□□□ -1.38
Cdx2P43241 Gm4997-201ENSMUST00000154056 360 ntBASIC6.4□□□□□ -1.38
Cdx2P43241 Mir1960-201ENSMUST00000157488 78 ntBASIC6.4□□□□□ -1.38
Cdx2P43241 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC6.4□□□□□ -1.38
Cdx2P43241 Gm17044-201ENSMUST00000168549 828 ntBASIC6.4□□□□□ -1.38
Cdx2P43241 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC6.4□□□□□ -1.38
Cdx2P43241 Gm20691-201ENSMUST00000176889 333 ntBASIC6.4□□□□□ -1.38
Cdx2P43241 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Cdx2P43241 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC6.4□□□□□ -1.38
Cdx2P43241 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Cdx2P43241 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Cdx2P43241 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Cdx2P43241 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC6.4□□□□□ -1.38
Cdx2P43241 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Cdx2P43241 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC6.4□□□□□ -1.38
Cdx2P43241 Gm8667-201ENSMUST00000211112 449 ntBASIC6.4□□□□□ -1.38
Cdx2P43241 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
Cdx2P43241 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC6.4□□□□□ -1.38
Cdx2P43241 AC131795.1-201ENSMUST00000219632 426 ntBASIC6.4□□□□□ -1.38
Cdx2P43241 Gm18112-201ENSMUST00000219862 1195 ntBASIC6.4□□□□□ -1.38
Cdx2P43241 AC132954.2-201ENSMUST00000222400 403 ntBASIC6.4□□□□□ -1.38
Cdx2P43241 AC163660.1-201ENSMUST00000223696 818 ntBASIC6.4□□□□□ -1.38
Cdx2P43241 Glycam1-203ENSMUST00000228060 528 ntAPPRIS ALT2 BASIC6.4□□□□□ -1.38
Cdx2P43241 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Cdx2P43241 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Cdx2P43241 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Cdx2P43241 Klrc2-205ENSMUST00000145984 2811 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Cdx2P43241 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Cdx2P43241 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC6.4□□□□□ -1.38
Cdx2P43241 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
Cdx2P43241 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
Cdx2P43241 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC6.4□□□□□ -1.39
Cdx2P43241 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Cdx2P43241 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Cdx2P43241 Gm43873-201ENSMUST00000204505 3938 ntBASIC6.4□□□□□ -1.39
Cdx2P43241 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Cdx2P43241 Gm43029-201ENSMUST00000201829 1535 ntBASIC6.4□□□□□ -1.39
Cdx2P43241 Gm10862-201ENSMUST00000193956 3350 ntBASIC6.4□□□□□ -1.39
Cdx2P43241 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Cdx2P43241 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Cdx2P43241 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC6.4□□□□□ -1.39
Cdx2P43241 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Cdx2P43241 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Cdx2P43241 Slc4a10-202ENSMUST00000102735 5482 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cdx2P43241 Heatr1-201ENSMUST00000059270 6780 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Cdx2P43241 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC6.39□□□□□ -1.39
Cdx2P43241 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Cdx2P43241 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cdx2P43241 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC6.39□□□□□ -1.39
Cdx2P43241 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Cdx2P43241 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Cdx2P43241 AC174797.5-201ENSMUST00000225055 1860 ntBASIC6.39□□□□□ -1.39
Cdx2P43241 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Cdx2P43241 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms