Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm10727-201ENSMUST00000197107 1602 ntBASIC6.32□□□□□ -1.4
Foxc1Q61572 Exd1-203ENSMUST00000171024 5290 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Foxc1Q61572 Gm44667-201ENSMUST00000207632 3337 ntBASIC6.32□□□□□ -1.4
Foxc1Q61572 2600014E21Rik-201ENSMUST00000186411 4805 ntTSL 5 BASIC6.32□□□□□ -1.4
Foxc1Q61572 Muc2-201ENSMUST00000026590 2032 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Foxc1Q61572 Ect2l-204ENSMUST00000208948 2862 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Foxc1Q61572 D5Ertd615e-202ENSMUST00000197016 3911 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Foxc1Q61572 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Foxc1Q61572 Arsg-201ENSMUST00000020928 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Foxc1Q61572 Dnttip2-201ENSMUST00000035776 2429 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Foxc1Q61572 Atxn3-201ENSMUST00000021606 5363 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
Foxc1Q61572 Sf3b1-201ENSMUST00000027127 6195 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Foxc1Q61572 Clec1a-202ENSMUST00000203162 5128 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Foxc1Q61572 Wdhd1-204ENSMUST00000187531 4260 ntAPPRIS P5 TSL 5 BASIC6.31□□□□□ -1.4
Foxc1Q61572 Kcnj15-208ENSMUST00000113862 5705 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Foxc1Q61572 Rhoh-201ENSMUST00000031106 5093 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Foxc1Q61572 Tspan9-203ENSMUST00000112173 3819 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Foxc1Q61572 Foxp3-204ENSMUST00000115740 3832 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Foxc1Q61572 Svil-210ENSMUST00000140448 7423 ntAPPRIS P3 TSL 5 BASIC6.31□□□□□ -1.4
Foxc1Q61572 Gm42597-201ENSMUST00000196663 1544 ntBASIC6.31□□□□□ -1.4
Foxc1Q61572 Olfr169-202ENSMUST00000215040 2316 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Foxc1Q61572 Plp1-202ENSMUST00000113085 2540 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Foxc1Q61572 Gsap-201ENSMUST00000036031 3745 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Foxc1Q61572 Slx4ip-202ENSMUST00000099311 5089 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Foxc1Q61572 Gm45407-201ENSMUST00000209499 3676 ntBASIC6.31□□□□□ -1.4
Foxc1Q61572 Scfd2-201ENSMUST00000072857 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Foxc1Q61572 Gm15880-201ENSMUST00000142678 2884 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Foxc1Q61572 Pcdh15-228ENSMUST00000152819 2867 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Foxc1Q61572 Gm2762-207ENSMUST00000202739 2665 ntBASIC6.31□□□□□ -1.4
Foxc1Q61572 Gm10482-202ENSMUST00000189825 2287 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Foxc1Q61572 Gfpt1-204ENSMUST00000113658 6238 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Foxc1Q61572 Gm29399-202ENSMUST00000187292 1495 ntTSL 5 BASIC6.31□□□□□ -1.4
Foxc1Q61572 Gm28249-203ENSMUST00000190011 1495 ntTSL 5 BASIC6.31□□□□□ -1.4
Foxc1Q61572 Gm10062-201ENSMUST00000072180 1470 ntBASIC6.31□□□□□ -1.4
Foxc1Q61572 Hbq1b-201ENSMUST00000101387 562 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Foxc1Q61572 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Foxc1Q61572 Ighv1-85-201ENSMUST00000103552 351 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Foxc1Q61572 Gm13379-201ENSMUST00000118053 621 ntBASIC6.31□□□□□ -1.4
Foxc1Q61572 Uqcc2-202ENSMUST00000118613 426 ntTSL 3 BASIC6.31□□□□□ -1.4
Foxc1Q61572 Gm7485-201ENSMUST00000119502 1109 ntBASIC6.31□□□□□ -1.4
Foxc1Q61572 Gm14852-201ENSMUST00000120065 647 ntBASIC6.31□□□□□ -1.4
Foxc1Q61572 Gm12773-201ENSMUST00000120134 587 ntBASIC6.31□□□□□ -1.4
Foxc1Q61572 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC6.31□□□□□ -1.4
Foxc1Q61572 Gm13358-201ENSMUST00000121427 569 ntBASIC6.31□□□□□ -1.4
Foxc1Q61572 Sms-ps-201ENSMUST00000121773 1101 ntBASIC6.31□□□□□ -1.4
Foxc1Q61572 Gm14162-201ENSMUST00000121985 601 ntBASIC6.31□□□□□ -1.4
Foxc1Q61572 Gm11760-201ENSMUST00000122355 796 ntBASIC6.31□□□□□ -1.4
Foxc1Q61572 Gm22198-201ENSMUST00000122659 307 ntBASIC6.31□□□□□ -1.4
Foxc1Q61572 Chn1os1-201ENSMUST00000123613 636 ntTSL 3 BASIC6.31□□□□□ -1.4
Foxc1Q61572 Gm15410-201ENSMUST00000127763 544 ntTSL 5 BASIC6.31□□□□□ -1.4
Foxc1Q61572 Olfr330-201ENSMUST00000134055 1134 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Foxc1Q61572 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Foxc1Q61572 Gm8813-201ENSMUST00000155930 595 ntBASIC6.31□□□□□ -1.4
Foxc1Q61572 Gm22534-201ENSMUST00000158173 104 ntBASIC6.31□□□□□ -1.4
Foxc1Q61572 Mir5135-201ENSMUST00000174997 79 ntBASIC6.31□□□□□ -1.4
Foxc1Q61572 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Foxc1Q61572 Gm17800-201ENSMUST00000182466 971 ntBASIC6.31□□□□□ -1.4
Foxc1Q61572 Mir8110-201ENSMUST00000183771 97 ntBASIC6.31□□□□□ -1.4
Foxc1Q61572 Gm7863-201ENSMUST00000184700 805 ntBASIC6.31□□□□□ -1.4
Foxc1Q61572 Il24-202ENSMUST00000187650 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Foxc1Q61572 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Foxc1Q61572 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC6.31□□□□□ -1.4
Foxc1Q61572 2610105M22Rik-201ENSMUST00000193707 1153 ntBASIC6.31□□□□□ -1.4
Foxc1Q61572 Trbv8-201ENSMUST00000194020 285 ntBASIC6.31□□□□□ -1.4
Foxc1Q61572 Gm37173-201ENSMUST00000194498 1017 ntBASIC6.31□□□□□ -1.4
Foxc1Q61572 Gm37637-201ENSMUST00000195540 1256 ntBASIC6.31□□□□□ -1.4
Foxc1Q61572 Gm44403-201ENSMUST00000198554 129 ntBASIC6.31□□□□□ -1.4
Foxc1Q61572 Gm4873-201ENSMUST00000199402 1203 ntBASIC6.31□□□□□ -1.4
Foxc1Q61572 Gm4742-201ENSMUST00000200261 771 ntBASIC6.31□□□□□ -1.4
Foxc1Q61572 4933432K03Rik-202ENSMUST00000206244 765 ntTSL 3 BASIC6.31□□□□□ -1.4
Foxc1Q61572 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC6.31□□□□□ -1.4
Foxc1Q61572 Olfr960-203ENSMUST00000216584 1148 ntAPPRIS ALT2 TSL 3 BASIC6.31□□□□□ -1.4
Foxc1Q61572 CT485606.2-201ENSMUST00000216728 401 ntTSL 3 BASIC6.31□□□□□ -1.4
Foxc1Q61572 Gm6150-201ENSMUST00000217775 577 ntBASIC6.31□□□□□ -1.4
Foxc1Q61572 Gm7045-201ENSMUST00000221466 605 ntBASIC6.31□□□□□ -1.4
Foxc1Q61572 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Foxc1Q61572 4930477G07Rik-202ENSMUST00000223195 947 ntTSL 5 BASIC6.31□□□□□ -1.4
Foxc1Q61572 CT009556.1-201ENSMUST00000227282 449 ntBASIC6.31□□□□□ -1.4
Foxc1Q61572 Ceacam14-201ENSMUST00000023953 1109 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Foxc1Q61572 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Foxc1Q61572 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Foxc1Q61572 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Foxc1Q61572 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Foxc1Q61572 1700010B08Rik-201ENSMUST00000073081 899 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Foxc1Q61572 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Foxc1Q61572 Def8-205ENSMUST00000108832 3242 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Foxc1Q61572 Def8-201ENSMUST00000001522 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Foxc1Q61572 Cldn1-201ENSMUST00000023154 3247 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Foxc1Q61572 Olfr1221-204ENSMUST00000217635 3753 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Foxc1Q61572 1700112J16Rik-201ENSMUST00000181631 2215 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Foxc1Q61572 Zkscan7-201ENSMUST00000063980 4722 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Foxc1Q61572 Hrh1-205ENSMUST00000161650 2978 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Foxc1Q61572 Gm9776-201ENSMUST00000059598 2980 ntBASIC6.31□□□□□ -1.4
Foxc1Q61572 Drp2-202ENSMUST00000113224 4147 ntTSL 5 BASIC6.31□□□□□ -1.4
Foxc1Q61572 Prkg1-201ENSMUST00000065067 3914 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Foxc1Q61572 I830134H01Rik-202ENSMUST00000181592 2755 ntBASIC6.31□□□□□ -1.4
Foxc1Q61572 Csnk1d-202ENSMUST00000070575 3500 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Foxc1Q61572 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Foxc1Q61572 Zfp551-202ENSMUST00000120220 2195 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Foxc1Q61572 Zmym1-203ENSMUST00000106102 3852 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms