Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Scrt1Q99M85 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Scrt1Q99M85 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Scrt1Q99M85 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
Scrt1Q99M85 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Scrt1Q99M85 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC5.98□□□□□ -1.45
Scrt1Q99M85 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Scrt1Q99M85 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Scrt1Q99M85 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Scrt1Q99M85 Gm6494-201ENSMUST00000218604 2298 ntBASIC5.97□□□□□ -1.45
Scrt1Q99M85 Gm37755-201ENSMUST00000195880 2179 ntBASIC5.97□□□□□ -1.45
Scrt1Q99M85 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Scrt1Q99M85 Gm14245-201ENSMUST00000118939 1843 ntBASIC5.97□□□□□ -1.45
Scrt1Q99M85 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Scrt1Q99M85 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Scrt1Q99M85 Gm37595-201ENSMUST00000192668 1742 ntBASIC5.97□□□□□ -1.45
Scrt1Q99M85 AC107742.1-201ENSMUST00000227769 1390 ntBASIC5.97□□□□□ -1.45
Scrt1Q99M85 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Scrt1Q99M85 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC5.97□□□□□ -1.45
Scrt1Q99M85 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC5.97□□□□□ -1.45
Scrt1Q99M85 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Scrt1Q99M85 Gm18716-201ENSMUST00000204507 1603 ntBASIC5.97□□□□□ -1.45
Scrt1Q99M85 AC159002.2-201ENSMUST00000228843 4874 ntBASIC5.97□□□□□ -1.45
Scrt1Q99M85 Gm38070-201ENSMUST00000191850 6480 ntBASIC5.97□□□□□ -1.45
Scrt1Q99M85 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Scrt1Q99M85 Gm12842-201ENSMUST00000117298 476 ntBASIC5.97□□□□□ -1.45
Scrt1Q99M85 Gm11821-201ENSMUST00000117335 979 ntBASIC5.97□□□□□ -1.45
Scrt1Q99M85 Gm14580-201ENSMUST00000119122 718 ntBASIC5.97□□□□□ -1.45
Scrt1Q99M85 BC064078-201ENSMUST00000122939 570 ntBASIC5.97□□□□□ -1.45
Scrt1Q99M85 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC5.97□□□□□ -1.45
Scrt1Q99M85 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC5.97□□□□□ -1.45
Scrt1Q99M85 Gm5125-201ENSMUST00000148614 624 ntBASIC5.97□□□□□ -1.45
Scrt1Q99M85 Mir199b-201ENSMUST00000175066 110 ntBASIC5.97□□□□□ -1.45
Scrt1Q99M85 Mir7020-201ENSMUST00000183787 70 ntBASIC5.97□□□□□ -1.45
Scrt1Q99M85 Zfp572-202ENSMUST00000184208 1078 ntBASIC5.97□□□□□ -1.45
Scrt1Q99M85 Gm5260-201ENSMUST00000186157 949 ntBASIC5.97□□□□□ -1.45
Scrt1Q99M85 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC5.97□□□□□ -1.45
Scrt1Q99M85 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC5.97□□□□□ -1.45
Scrt1Q99M85 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Scrt1Q99M85 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC5.97□□□□□ -1.45
Scrt1Q99M85 Gm17895-201ENSMUST00000194028 874 ntBASIC5.97□□□□□ -1.45
Scrt1Q99M85 Gm29784-201ENSMUST00000196217 406 ntBASIC5.97□□□□□ -1.45
Scrt1Q99M85 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Scrt1Q99M85 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC5.97□□□□□ -1.45
Scrt1Q99M85 Gm44422-201ENSMUST00000204142 1025 ntBASIC5.97□□□□□ -1.45
Scrt1Q99M85 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC5.97□□□□□ -1.45
Scrt1Q99M85 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC5.97□□□□□ -1.45
Scrt1Q99M85 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC5.97□□□□□ -1.45
Scrt1Q99M85 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC5.97□□□□□ -1.45
Scrt1Q99M85 Gm34424-201ENSMUST00000213400 782 ntBASIC5.97□□□□□ -1.45
Scrt1Q99M85 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC5.97□□□□□ -1.45
Scrt1Q99M85 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC5.97□□□□□ -1.45
Scrt1Q99M85 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Scrt1Q99M85 Gm2089-201ENSMUST00000218294 479 ntBASIC5.97□□□□□ -1.45
Scrt1Q99M85 AC126685.1-201ENSMUST00000221001 121 ntBASIC5.97□□□□□ -1.45
Scrt1Q99M85 AC172989.1-201ENSMUST00000226387 513 ntBASIC5.97□□□□□ -1.45
Scrt1Q99M85 Mir296-201ENSMUST00000083587 79 ntBASIC5.97□□□□□ -1.45
Scrt1Q99M85 Gm16020-201ENSMUST00000084281 210 ntBASIC5.97□□□□□ -1.45
Scrt1Q99M85 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Scrt1Q99M85 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Scrt1Q99M85 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Scrt1Q99M85 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
Scrt1Q99M85 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Scrt1Q99M85 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Scrt1Q99M85 AC103672.2-201ENSMUST00000228146 1687 ntBASIC5.97□□□□□ -1.45
Scrt1Q99M85 Gm28667-201ENSMUST00000189873 2171 ntBASIC5.97□□□□□ -1.45
Scrt1Q99M85 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Scrt1Q99M85 Apobec1-203ENSMUST00000112587 2072 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Scrt1Q99M85 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Scrt1Q99M85 Gm20121-201ENSMUST00000198547 1594 ntBASIC5.97□□□□□ -1.45
Scrt1Q99M85 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Scrt1Q99M85 Gm43612-201ENSMUST00000196087 3207 ntBASIC5.97□□□□□ -1.45
Scrt1Q99M85 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Scrt1Q99M85 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Scrt1Q99M85 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.45
Scrt1Q99M85 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC5.96□□□□□ -1.45
Scrt1Q99M85 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.45
Scrt1Q99M85 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Scrt1Q99M85 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.45
Scrt1Q99M85 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Scrt1Q99M85 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
Scrt1Q99M85 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC5.96□□□□□ -1.45
Scrt1Q99M85 AC124581.3-201ENSMUST00000224270 1624 ntBASIC5.96□□□□□ -1.45
Scrt1Q99M85 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Scrt1Q99M85 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC5.96□□□□□ -1.45
Scrt1Q99M85 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
Scrt1Q99M85 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Scrt1Q99M85 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
Scrt1Q99M85 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Scrt1Q99M85 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.46
Scrt1Q99M85 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Scrt1Q99M85 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Scrt1Q99M85 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC5.96□□□□□ -1.46
Scrt1Q99M85 Gm15422-201ENSMUST00000117453 541 ntBASIC5.96□□□□□ -1.46
Scrt1Q99M85 Gm14212-201ENSMUST00000122023 826 ntBASIC5.96□□□□□ -1.46
Scrt1Q99M85 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Scrt1Q99M85 Gm11107-201ENSMUST00000165414 505 ntBASIC5.96□□□□□ -1.46
Scrt1Q99M85 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Scrt1Q99M85 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Scrt1Q99M85 Gm22119-201ENSMUST00000175594 99 ntBASIC5.96□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 99.5 ms