Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC7.38□□□□□ -1.23
Trim9Q8C7M3 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC7.38□□□□□ -1.23
Trim9Q8C7M3 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC7.38□□□□□ -1.23
Trim9Q8C7M3 CT030194.1-201ENSMUST00000225507 532 ntBASIC7.38□□□□□ -1.23
Trim9Q8C7M3 Olfr735-201ENSMUST00000049729 1065 ntAPPRIS P2 BASIC7.38□□□□□ -1.23
Trim9Q8C7M3 Gpr87-201ENSMUST00000056898 1080 ntBASIC7.38□□□□□ -1.23
Trim9Q8C7M3 Gm24621-201ENSMUST00000082679 140 ntBASIC7.38□□□□□ -1.23
Trim9Q8C7M3 Gm24411-201ENSMUST00000083428 131 ntBASIC7.38□□□□□ -1.23
Trim9Q8C7M3 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Trim9Q8C7M3 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Trim9Q8C7M3 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Trim9Q8C7M3 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
Trim9Q8C7M3 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Trim9Q8C7M3 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Trim9Q8C7M3 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Trim9Q8C7M3 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Trim9Q8C7M3 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Trim9Q8C7M3 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Trim9Q8C7M3 AC165080.3-201ENSMUST00000217162 3116 ntBASIC7.38□□□□□ -1.23
Trim9Q8C7M3 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Trim9Q8C7M3 AC158537.1-201ENSMUST00000224637 1711 ntBASIC7.38□□□□□ -1.23
Trim9Q8C7M3 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Trim9Q8C7M3 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Trim9Q8C7M3 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
Trim9Q8C7M3 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Trim9Q8C7M3 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim9Q8C7M3 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Trim9Q8C7M3 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Trim9Q8C7M3 Gm44895-201ENSMUST00000206670 1538 ntBASIC7.37□□□□□ -1.23
Trim9Q8C7M3 Gm44194-201ENSMUST00000204222 3229 ntBASIC7.37□□□□□ -1.23
Trim9Q8C7M3 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Trim9Q8C7M3 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Trim9Q8C7M3 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Trim9Q8C7M3 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Trim9Q8C7M3 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim9Q8C7M3 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Trim9Q8C7M3 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
Trim9Q8C7M3 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim9Q8C7M3 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC7.37□□□□□ -1.23
Trim9Q8C7M3 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim9Q8C7M3 Gm2178-201ENSMUST00000104927 357 ntBASIC7.37□□□□□ -1.23
Trim9Q8C7M3 Gm15621-201ENSMUST00000119162 364 ntBASIC7.37□□□□□ -1.23
Trim9Q8C7M3 Gm12135-201ENSMUST00000119170 466 ntBASIC7.37□□□□□ -1.23
Trim9Q8C7M3 Gm15149-201ENSMUST00000119370 360 ntBASIC7.37□□□□□ -1.23
Trim9Q8C7M3 Gm11198-201ENSMUST00000119771 974 ntBASIC7.37□□□□□ -1.23
Trim9Q8C7M3 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC7.37□□□□□ -1.23
Trim9Q8C7M3 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC7.37□□□□□ -1.23
Trim9Q8C7M3 Gm12372-201ENSMUST00000121654 768 ntBASIC7.37□□□□□ -1.23
Trim9Q8C7M3 Gm25109-201ENSMUST00000122474 114 ntBASIC7.37□□□□□ -1.23
Trim9Q8C7M3 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC7.37□□□□□ -1.23
Trim9Q8C7M3 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC7.37□□□□□ -1.23
Trim9Q8C7M3 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Trim9Q8C7M3 Gm14457-201ENSMUST00000148069 1161 ntBASIC7.37□□□□□ -1.23
Trim9Q8C7M3 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Trim9Q8C7M3 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Trim9Q8C7M3 Gm26381-201ENSMUST00000174895 92 ntBASIC7.37□□□□□ -1.23
Trim9Q8C7M3 1700022N22Rik-201ENSMUST00000180932 709 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Trim9Q8C7M3 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim9Q8C7M3 Mir6348-201ENSMUST00000183804 120 ntBASIC7.37□□□□□ -1.23
Trim9Q8C7M3 Mir7033-201ENSMUST00000184259 81 ntBASIC7.37□□□□□ -1.23
Trim9Q8C7M3 Gm28528-201ENSMUST00000188560 857 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim9Q8C7M3 Gm37526-201ENSMUST00000194640 619 ntBASIC7.37□□□□□ -1.23
Trim9Q8C7M3 Gm37676-201ENSMUST00000195496 507 ntBASIC7.37□□□□□ -1.23
Trim9Q8C7M3 Gm37490-201ENSMUST00000195566 724 ntBASIC7.37□□□□□ -1.23
Trim9Q8C7M3 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC7.37□□□□□ -1.23
Trim9Q8C7M3 Gm4585-201ENSMUST00000207218 452 ntBASIC7.37□□□□□ -1.23
Trim9Q8C7M3 Gm44554-201ENSMUST00000208738 147 ntBASIC7.37□□□□□ -1.23
Trim9Q8C7M3 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Trim9Q8C7M3 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Trim9Q8C7M3 Gm17849-201ENSMUST00000219788 853 ntBASIC7.37□□□□□ -1.23
Trim9Q8C7M3 Prss58-201ENSMUST00000063523 979 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Trim9Q8C7M3 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Trim9Q8C7M3 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Trim9Q8C7M3 Vmn1r78-201ENSMUST00000078039 942 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Trim9Q8C7M3 Gm6887-201ENSMUST00000080945 482 ntBASIC7.37□□□□□ -1.23
Trim9Q8C7M3 n-R5s56-201ENSMUST00000082521 105 ntBASIC7.37□□□□□ -1.23
Trim9Q8C7M3 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Trim9Q8C7M3 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Trim9Q8C7M3 5430401H09Rik-202ENSMUST00000218836 2620 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Trim9Q8C7M3 Tcf24-201ENSMUST00000097824 2639 ntBASIC7.37□□□□□ -1.23
Trim9Q8C7M3 Gm42996-201ENSMUST00000196116 1636 ntBASIC7.37□□□□□ -1.23
Trim9Q8C7M3 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Trim9Q8C7M3 Unc80-201ENSMUST00000061620 13613 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Trim9Q8C7M3 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Trim9Q8C7M3 Gm44186-201ENSMUST00000204118 2752 ntBASIC7.37□□□□□ -1.23
Trim9Q8C7M3 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Trim9Q8C7M3 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Trim9Q8C7M3 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Trim9Q8C7M3 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim9Q8C7M3 Gm44677-201ENSMUST00000209151 3739 ntBASIC7.36□□□□□ -1.23
Trim9Q8C7M3 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC7.36□□□□□ -1.23
Trim9Q8C7M3 Gm37595-201ENSMUST00000192668 1742 ntBASIC7.36□□□□□ -1.23
Trim9Q8C7M3 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim9Q8C7M3 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
Trim9Q8C7M3 Thap6-201ENSMUST00000191860 3151 ntBASIC7.36□□□□□ -1.23
Trim9Q8C7M3 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Trim9Q8C7M3 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim9Q8C7M3 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Trim9Q8C7M3 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Trim9Q8C7M3 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms