Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Gm6055-201ENSMUST00000180532 378 ntBASIC7.72□□□□□ -1.17
Syne4Q8CII8 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC7.72□□□□□ -1.17
Syne4Q8CII8 Gm27468-201ENSMUST00000183577 106 ntBASIC7.72□□□□□ -1.17
Syne4Q8CII8 Gm27152-201ENSMUST00000183828 99 ntBASIC7.72□□□□□ -1.17
Syne4Q8CII8 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC7.72□□□□□ -1.17
Syne4Q8CII8 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Syne4Q8CII8 Gm43501-201ENSMUST00000202513 107 ntBASIC7.72□□□□□ -1.17
Syne4Q8CII8 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC7.72□□□□□ -1.17
Syne4Q8CII8 Gm44111-201ENSMUST00000204649 399 ntBASIC7.72□□□□□ -1.17
Syne4Q8CII8 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC7.72□□□□□ -1.17
Syne4Q8CII8 Gm44861-201ENSMUST00000208325 1220 ntBASIC7.72□□□□□ -1.17
Syne4Q8CII8 Gm45448-201ENSMUST00000211739 209 ntBASIC7.72□□□□□ -1.17
Syne4Q8CII8 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Syne4Q8CII8 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Syne4Q8CII8 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Syne4Q8CII8 Gm10221-201ENSMUST00000088299 309 ntBASIC7.72□□□□□ -1.17
Syne4Q8CII8 Deptor-201ENSMUST00000023056 3300 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Syne4Q8CII8 AC159193.3-201ENSMUST00000221902 2622 ntBASIC7.72□□□□□ -1.17
Syne4Q8CII8 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Syne4Q8CII8 Gm37138-201ENSMUST00000194564 2089 ntBASIC7.72□□□□□ -1.17
Syne4Q8CII8 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Syne4Q8CII8 Gm18879-201ENSMUST00000221187 1537 ntBASIC7.72□□□□□ -1.17
Syne4Q8CII8 Pdlim5-203ENSMUST00000090134 1722 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Syne4Q8CII8 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
Syne4Q8CII8 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC7.71□□□□□ -1.17
Syne4Q8CII8 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Syne4Q8CII8 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC7.71□□□□□ -1.17
Syne4Q8CII8 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Syne4Q8CII8 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Syne4Q8CII8 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Syne4Q8CII8 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Syne4Q8CII8 Dgkh-206ENSMUST00000228362 3308 ntBASIC7.71□□□□□ -1.17
Syne4Q8CII8 Gm25346-201ENSMUST00000104509 128 ntBASIC7.71□□□□□ -1.18
Syne4Q8CII8 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC7.71□□□□□ -1.18
Syne4Q8CII8 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC7.71□□□□□ -1.18
Syne4Q8CII8 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC7.71□□□□□ -1.18
Syne4Q8CII8 Gm25722-201ENSMUST00000157498 279 ntBASIC7.71□□□□□ -1.18
Syne4Q8CII8 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Syne4Q8CII8 Mir7235-201ENSMUST00000183796 56 ntBASIC7.71□□□□□ -1.18
Syne4Q8CII8 Gm37475-201ENSMUST00000193107 1015 ntBASIC7.71□□□□□ -1.18
Syne4Q8CII8 Gm37480-201ENSMUST00000194795 550 ntTSL 5 BASIC7.71□□□□□ -1.18
Syne4Q8CII8 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC7.71□□□□□ -1.18
Syne4Q8CII8 AL713985.1-201ENSMUST00000219030 420 ntBASIC7.71□□□□□ -1.18
Syne4Q8CII8 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Syne4Q8CII8 AC154861.1-201ENSMUST00000223767 800 ntBASIC7.71□□□□□ -1.18
Syne4Q8CII8 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Syne4Q8CII8 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Syne4Q8CII8 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Syne4Q8CII8 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC7.71□□□□□ -1.18
Syne4Q8CII8 Taar4-201ENSMUST00000092660 1044 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Syne4Q8CII8 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Syne4Q8CII8 CT009480.1-201ENSMUST00000225771 4480 ntBASIC7.71□□□□□ -1.18
Syne4Q8CII8 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Syne4Q8CII8 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Syne4Q8CII8 Gm3892-202ENSMUST00000178043 3539 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Syne4Q8CII8 Gm10593-201ENSMUST00000178906 3539 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Syne4Q8CII8 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC7.71□□□□□ -1.18
Syne4Q8CII8 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Syne4Q8CII8 Msn-201ENSMUST00000117399 3842 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Syne4Q8CII8 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC7.71□□□□□ -1.18
Syne4Q8CII8 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Syne4Q8CII8 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Syne4Q8CII8 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Syne4Q8CII8 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Syne4Q8CII8 Dclk1-208ENSMUST00000198437 4315 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Syne4Q8CII8 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Syne4Q8CII8 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Syne4Q8CII8 Olfr669-203ENSMUST00000214260 2336 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Syne4Q8CII8 AC116476.1-201ENSMUST00000226274 2318 ntBASIC7.7□□□□□ -1.18
Syne4Q8CII8 Mtm1-205ENSMUST00000114617 3338 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Syne4Q8CII8 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC7.7□□□□□ -1.18
Syne4Q8CII8 Mtm1-202ENSMUST00000033700 3316 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Syne4Q8CII8 AC154461.6-201ENSMUST00000224815 2630 ntBASIC7.7□□□□□ -1.18
Syne4Q8CII8 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC7.7□□□□□ -1.18
Syne4Q8CII8 Eml1-201ENSMUST00000054955 3879 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Syne4Q8CII8 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Syne4Q8CII8 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Syne4Q8CII8 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Syne4Q8CII8 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Syne4Q8CII8 Yes1-202ENSMUST00000168707 2259 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Syne4Q8CII8 Gm10555-201ENSMUST00000193178 1791 ntBASIC7.7□□□□□ -1.18
Syne4Q8CII8 Gm13626-201ENSMUST00000119435 402 ntBASIC7.7□□□□□ -1.18
Syne4Q8CII8 Gm26162-201ENSMUST00000157793 132 ntBASIC7.7□□□□□ -1.18
Syne4Q8CII8 Gm25717-201ENSMUST00000158631 353 ntBASIC7.7□□□□□ -1.18
Syne4Q8CII8 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC7.7□□□□□ -1.18
Syne4Q8CII8 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Syne4Q8CII8 Gm9274-201ENSMUST00000182505 984 ntBASIC7.7□□□□□ -1.18
Syne4Q8CII8 Gm9658-201ENSMUST00000182757 1012 ntBASIC7.7□□□□□ -1.18
Syne4Q8CII8 Mir7020-201ENSMUST00000183787 70 ntBASIC7.7□□□□□ -1.18
Syne4Q8CII8 Mir7653-201ENSMUST00000184358 61 ntBASIC7.7□□□□□ -1.18
Syne4Q8CII8 Gm42584-201ENSMUST00000201404 220 ntBASIC7.7□□□□□ -1.18
Syne4Q8CII8 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC7.7□□□□□ -1.18
Syne4Q8CII8 Gm3266-201ENSMUST00000217832 591 ntBASIC7.7□□□□□ -1.18
Syne4Q8CII8 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC7.7□□□□□ -1.18
Syne4Q8CII8 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Syne4Q8CII8 Olfr958-201ENSMUST00000062545 942 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Syne4Q8CII8 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Syne4Q8CII8 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Syne4Q8CII8 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Syne4Q8CII8 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 104.6 ms