Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col4a1P02463 Trub1-201ENSMUST00000026072 4300 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Col4a1P02463 Gm28322-201ENSMUST00000185627 1475 ntBASIC8.06□□□□□ -1.12
Col4a1P02463 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Col4a1P02463 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC8.06□□□□□ -1.12
Col4a1P02463 Gm43496-201ENSMUST00000201682 3001 ntBASIC8.06□□□□□ -1.12
Col4a1P02463 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
Col4a1P02463 Adgrl3-205ENSMUST00000117985 4974 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Col4a1P02463 Adgrl3-212ENSMUST00000120144 4999 ntTSL 5 BASIC8.06□□□□□ -1.12
Col4a1P02463 AC154806.2-201ENSMUST00000227212 2385 ntBASIC8.06□□□□□ -1.12
Col4a1P02463 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col4a1P02463 Phf3-201ENSMUST00000088310 7561 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col4a1P02463 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Col4a1P02463 Hipk1-203ENSMUST00000118317 7939 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col4a1P02463 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col4a1P02463 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col4a1P02463 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC8.06□□□□□ -1.12
Col4a1P02463 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Col4a1P02463 Gm37653-201ENSMUST00000195401 3578 ntBASIC8.05□□□□□ -1.12
Col4a1P02463 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Col4a1P02463 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Col4a1P02463 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Col4a1P02463 Gm14796-201ENSMUST00000121216 959 ntBASIC8.05□□□□□ -1.12
Col4a1P02463 Gm25374-201ENSMUST00000158158 101 ntBASIC8.05□□□□□ -1.12
Col4a1P02463 Mir5110-201ENSMUST00000175537 87 ntBASIC8.05□□□□□ -1.12
Col4a1P02463 Gm18849-201ENSMUST00000189861 560 ntBASIC8.05□□□□□ -1.12
Col4a1P02463 Gm20926-201ENSMUST00000194457 696 ntBASIC8.05□□□□□ -1.12
Col4a1P02463 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Col4a1P02463 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC8.05□□□□□ -1.12
Col4a1P02463 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC8.05□□□□□ -1.12
Col4a1P02463 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC8.05□□□□□ -1.12
Col4a1P02463 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC8.05□□□□□ -1.12
Col4a1P02463 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Col4a1P02463 Gm25133-201ENSMUST00000082647 130 ntBASIC8.05□□□□□ -1.12
Col4a1P02463 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC8.05□□□□□ -1.12
Col4a1P02463 Map3k7-204ENSMUST00000108184 5491 ntTSL 5 BASIC8.05□□□□□ -1.12
Col4a1P02463 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Col4a1P02463 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Col4a1P02463 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC8.05□□□□□ -1.12
Col4a1P02463 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
Col4a1P02463 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col4a1P02463 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col4a1P02463 Vps8-206ENSMUST00000118923 4838 ntTSL 5 BASIC8.05□□□□□ -1.12
Col4a1P02463 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC8.05□□□□□ -1.12
Col4a1P02463 Cd36-203ENSMUST00000169095 2677 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col4a1P02463 AC135083.2-201ENSMUST00000228599 1456 ntBASIC8.05□□□□□ -1.12
Col4a1P02463 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Col4a1P02463 Stag1-201ENSMUST00000041418 5909 ntTSL 5 BASIC8.05□□□□□ -1.12
Col4a1P02463 Gm15901-201ENSMUST00000117663 941 ntBASIC8.05□□□□□ -1.12
Col4a1P02463 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col4a1P02463 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col4a1P02463 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col4a1P02463 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col4a1P02463 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col4a1P02463 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col4a1P02463 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col4a1P02463 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col4a1P02463 Gm21728-201ENSMUST00000188442 695 ntBASIC8.05□□□□□ -1.12
Col4a1P02463 Gm21889-201ENSMUST00000188487 695 ntBASIC8.05□□□□□ -1.12
Col4a1P02463 Gm20932-201ENSMUST00000189115 694 ntBASIC8.05□□□□□ -1.12
Col4a1P02463 Gm21920-201ENSMUST00000190042 695 ntBASIC8.05□□□□□ -1.12
Col4a1P02463 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col4a1P02463 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col4a1P02463 Gm8860-201ENSMUST00000193160 445 ntBASIC8.05□□□□□ -1.12
Col4a1P02463 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Col4a1P02463 Gm3800-201ENSMUST00000221086 554 ntBASIC8.05□□□□□ -1.12
Col4a1P02463 Gm9788-201ENSMUST00000057038 906 ntBASIC8.05□□□□□ -1.12
Col4a1P02463 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Col4a1P02463 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Col4a1P02463 Kcnj15-208ENSMUST00000113862 5705 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Col4a1P02463 Nckap5-208ENSMUST00000161954 7090 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col4a1P02463 Vmn1r199-203ENSMUST00000227689 5537 ntAPPRIS ALT2 BASIC8.05□□□□□ -1.12
Col4a1P02463 CT025566.1-202ENSMUST00000224800 2511 ntBASIC8.04□□□□□ -1.12
Col4a1P02463 Ankrd6-203ENSMUST00000084749 4573 ntAPPRIS P2 TSL 5 BASIC8.04□□□□□ -1.12
Col4a1P02463 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Col4a1P02463 Phf3-205ENSMUST00000186733 7567 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Col4a1P02463 Lhfpl2-204ENSMUST00000121618 4209 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col4a1P02463 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Col4a1P02463 Anapc1-201ENSMUST00000014499 8942 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col4a1P02463 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Col4a1P02463 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC8.04□□□□□ -1.12
Col4a1P02463 Gm43982-201ENSMUST00000204995 1829 ntBASIC8.04□□□□□ -1.12
Col4a1P02463 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Col4a1P02463 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col4a1P02463 Adcy10-202ENSMUST00000111439 5193 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Col4a1P02463 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Col4a1P02463 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col4a1P02463 Ice1-201ENSMUST00000043493 7667 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Col4a1P02463 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col4a1P02463 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col4a1P02463 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC8.04□□□□□ -1.12
Col4a1P02463 Gm15016-201ENSMUST00000117300 720 ntBASIC8.04□□□□□ -1.12
Col4a1P02463 Gm14356-201ENSMUST00000118322 869 ntBASIC8.04□□□□□ -1.12
Col4a1P02463 M6pr-ps-201ENSMUST00000120481 830 ntBASIC8.04□□□□□ -1.12
Col4a1P02463 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC8.04□□□□□ -1.12
Col4a1P02463 Gm23031-201ENSMUST00000157998 119 ntBASIC8.04□□□□□ -1.12
Col4a1P02463 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC8.04□□□□□ -1.12
Col4a1P02463 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Col4a1P02463 Gm28080-201ENSMUST00000188552 722 ntBASIC8.04□□□□□ -1.12
Col4a1P02463 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms