Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm19815-201ENSMUST00000175818 335 ntBASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Gm5835-201ENSMUST00000185806 1270 ntBASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Gm38041-201ENSMUST00000194445 661 ntBASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Gm37481-201ENSMUST00000195176 403 ntBASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Gm43007-201ENSMUST00000197618 291 ntBASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Gm43171-201ENSMUST00000199882 291 ntBASIC8.56□□□□□ -1.04
Trim47Q8C0E3 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Ube2n-ps1-201ENSMUST00000201768 459 ntBASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Hba-x-201ENSMUST00000020531 801 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim47Q8C0E3 A730082K24Rik-202ENSMUST00000205795 658 ntTSL 3 BASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Ctxn3-203ENSMUST00000209786 1283 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Gm4668-201ENSMUST00000214742 943 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Gm18997-201ENSMUST00000216353 822 ntBASIC8.56□□□□□ -1.04
Trim47Q8C0E3 AC123920.1-201ENSMUST00000221449 384 ntBASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Gm33467-201ENSMUST00000221885 652 ntTSL 3 BASIC8.56□□□□□ -1.04
Trim47Q8C0E3 AC154573.2-201ENSMUST00000224174 378 ntBASIC8.56□□□□□ -1.04
Trim47Q8C0E3 AC157650.2-201ENSMUST00000224666 328 ntBASIC8.56□□□□□ -1.04
Trim47Q8C0E3 CT571256.1-201ENSMUST00000226045 585 ntBASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Spink6-201ENSMUST00000068473 587 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Rpl31-ps20-201ENSMUST00000080982 378 ntBASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Mir135b-201ENSMUST00000083501 97 ntBASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Dsc3-203ENSMUST00000225110 3123 ntAPPRIS P2 BASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Plxna2-201ENSMUST00000027952 11040 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim47Q8C0E3 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC8.56□□□□□ -1.04
Trim47Q8C0E3 4932415M13Rik-202ENSMUST00000184645 3063 ntTSL 2 BASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Cdh8-207ENSMUST00000155527 3159 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trim47Q8C0E3 D3Ertd254e-202ENSMUST00000197653 6689 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Mak-201ENSMUST00000021792 3385 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim47Q8C0E3 AC168056.4-201ENSMUST00000223835 2567 ntBASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Mast4-201ENSMUST00000099202 7709 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Trim47Q8C0E3 8430437L04Rik-201ENSMUST00000124829 1663 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Cenpi-201ENSMUST00000081064 3227 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Pds5b-202ENSMUST00000038900 7315 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Gm36823-203ENSMUST00000199408 1792 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Trim47Q8C0E3 Gm17552-201ENSMUST00000181211 3877 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Cfap161-202ENSMUST00000119134 2868 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Hipk1-202ENSMUST00000106845 3967 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Itgb6-203ENSMUST00000112517 3537 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Gykl1-201ENSMUST00000066193 1990 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Cpne4-203ENSMUST00000098443 1421 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trim47Q8C0E3 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Olfr1441-202ENSMUST00000214153 2078 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Nkrf-201ENSMUST00000057093 3268 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Abi1-212ENSMUST00000153931 2729 ntAPPRIS ALT1 TSL 5 BASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Lig3-201ENSMUST00000021039 5957 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Nfkbiz-203ENSMUST00000114457 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Prex2-201ENSMUST00000027056 11053 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Slc2a2-201ENSMUST00000029240 5569 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Ms4a6b-205ENSMUST00000163078 2680 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Trim47Q8C0E3 RMST_1.1-209ENSMUST00000219444 2679 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Myh10-202ENSMUST00000092984 7759 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Gm5390-201ENSMUST00000119069 1230 ntBASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Gm14883-201ENSMUST00000120179 157 ntBASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Gm12044-201ENSMUST00000120335 213 ntBASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Gm13484-201ENSMUST00000120738 412 ntBASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Gm11689-201ENSMUST00000120766 302 ntBASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Gm12770-201ENSMUST00000121734 462 ntBASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Gm15644-201ENSMUST00000121764 387 ntBASIC8.55□□□□□ -1.04
Trim47Q8C0E3 n-R5s47-201ENSMUST00000122516 119 ntBASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC8.55□□□□□ -1.04
Trim47Q8C0E3 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Gm4835-201ENSMUST00000155839 972 ntBASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Gm9141-201ENSMUST00000159355 1007 ntBASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Gm26335-201ENSMUST00000178449 107 ntBASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Gm27905-201ENSMUST00000184005 207 ntBASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Gm20111-201ENSMUST00000184830 319 ntBASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Gm29999-202ENSMUST00000193554 671 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Gm37729-201ENSMUST00000194761 1172 ntBASIC8.55□□□□□ -1.04
Trim47Q8C0E3 1700039M15Rik-201ENSMUST00000195377 1120 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Gm43590-201ENSMUST00000195987 387 ntBASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Gm43226-201ENSMUST00000202438 259 ntBASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Olfr316-201ENSMUST00000203731 1011 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Olfr674-ps1-201ENSMUST00000209383 946 ntBASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Gm45608-201ENSMUST00000210948 389 ntBASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Akr1c21-201ENSMUST00000021628 1207 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim47Q8C0E3 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Gm18228-201ENSMUST00000217297 1091 ntBASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Gm4921-201ENSMUST00000219804 992 ntBASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Gm19011-201ENSMUST00000221777 808 ntBASIC8.55□□□□□ -1.04
Trim47Q8C0E3 7420701I03Rik-201ENSMUST00000222157 737 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Trim47Q8C0E3 AC192333.1-201ENSMUST00000224573 376 ntBASIC8.55□□□□□ -1.04
Trim47Q8C0E3 AC162183.1-201ENSMUST00000224843 472 ntBASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Cfap126-201ENSMUST00000027959 1034 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Trim47Q8C0E3 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms