Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm21614-201ENSMUST00000183260 1005 ntBASIC9.53□□□□□ -0.88
Trim35Q8C006 1700095A13Rik-201ENSMUST00000185460 711 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trim35Q8C006 Gm28871-201ENSMUST00000186191 687 ntBASIC9.53□□□□□ -0.88
Trim35Q8C006 Gm37994-201ENSMUST00000192124 409 ntBASIC9.53□□□□□ -0.88
Trim35Q8C006 Gm37336-202ENSMUST00000193705 468 ntBASIC9.53□□□□□ -0.88
Trim35Q8C006 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC9.53□□□□□ -0.88
Trim35Q8C006 6430531B16Rik-205ENSMUST00000210254 952 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim35Q8C006 Gm45521-201ENSMUST00000211339 676 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Trim35Q8C006 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC9.53□□□□□ -0.88
Trim35Q8C006 Gm8834-201ENSMUST00000216459 565 ntBASIC9.53□□□□□ -0.88
Trim35Q8C006 AC161424.1-201ENSMUST00000216969 666 ntTSL 5 BASIC9.53□□□□□ -0.88
Trim35Q8C006 AC116589.8-201ENSMUST00000220945 364 ntTSL 2 BASIC9.53□□□□□ -0.88
Trim35Q8C006 Gm7045-201ENSMUST00000221466 605 ntBASIC9.53□□□□□ -0.88
Trim35Q8C006 AC163660.3-202ENSMUST00000224917 464 ntBASIC9.53□□□□□ -0.88
Trim35Q8C006 AC167013.3-201ENSMUST00000228110 989 ntBASIC9.53□□□□□ -0.88
Trim35Q8C006 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC9.53□□□□□ -0.88
Trim35Q8C006 6330415B21Rik-201ENSMUST00000204215 2200 ntBASIC9.53□□□□□ -0.88
Trim35Q8C006 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim35Q8C006 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim35Q8C006 Nefm-201ENSMUST00000022638 3334 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim35Q8C006 Gm26785-201ENSMUST00000181775 2914 ntTSL 3 BASIC9.53□□□□□ -0.88
Trim35Q8C006 Ovch2-201ENSMUST00000106755 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim35Q8C006 Siglech-201ENSMUST00000060416 2138 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim35Q8C006 Dock1-201ENSMUST00000084488 6807 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Trim35Q8C006 Pax9-203ENSMUST00000153250 4232 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Trim35Q8C006 Gm29025-201ENSMUST00000186756 2163 ntTSL 5 BASIC9.53□□□□□ -0.88
Trim35Q8C006 Gm36638-202ENSMUST00000192073 2169 ntBASIC9.53□□□□□ -0.88
Trim35Q8C006 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC9.53□□□□□ -0.88
Trim35Q8C006 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC9.53□□□□□ -0.88
Trim35Q8C006 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC9.53□□□□□ -0.88
Trim35Q8C006 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC9.53□□□□□ -0.88
Trim35Q8C006 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC9.53□□□□□ -0.88
Trim35Q8C006 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC9.53□□□□□ -0.88
Trim35Q8C006 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC9.53□□□□□ -0.88
Trim35Q8C006 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC9.53□□□□□ -0.88
Trim35Q8C006 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC9.53□□□□□ -0.88
Trim35Q8C006 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC9.53□□□□□ -0.88
Trim35Q8C006 CT009515.4-201ENSMUST00000228165 1494 ntBASIC9.53□□□□□ -0.88
Trim35Q8C006 Kcnj10-201ENSMUST00000056136 5407 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trim35Q8C006 CT025642.2-201ENSMUST00000225009 1649 ntBASIC9.53□□□□□ -0.88
Trim35Q8C006 Olfr1510-202ENSMUST00000215928 1934 ntAPPRIS P1 TSL 3 BASIC9.52□□□□□ -0.88
Trim35Q8C006 Pcdhb5-201ENSMUST00000078271 3535 ntAPPRIS P1 BASIC9.52□□□□□ -0.88
Trim35Q8C006 Gm2492-201ENSMUST00000221355 1394 ntBASIC9.52□□□□□ -0.88
Trim35Q8C006 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Trim35Q8C006 Carhsp1-201ENSMUST00000008537 2849 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Trim35Q8C006 Ccpg1-202ENSMUST00000085350 2969 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Trim35Q8C006 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Trim35Q8C006 Nos2-203ENSMUST00000214397 3429 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Trim35Q8C006 Pa2g4-201ENSMUST00000026425 2432 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trim35Q8C006 Srsf3-202ENSMUST00000130216 2566 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trim35Q8C006 Kcnt1-215ENSMUST00000200434 3609 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Trim35Q8C006 Stxbp5l-206ENSMUST00000114787 4394 ntAPPRIS P3 TSL 5 BASIC9.52□□□□□ -0.89
Trim35Q8C006 Sema4d-202ENSMUST00000110039 4415 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trim35Q8C006 Gm1821-201ENSMUST00000111388 685 ntBASIC9.52□□□□□ -0.89
Trim35Q8C006 Apoo-201ENSMUST00000113895 1173 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trim35Q8C006 Ube2l3-203ENSMUST00000115700 571 ntTSL 5 BASIC9.52□□□□□ -0.89
Trim35Q8C006 Fam220-ps-201ENSMUST00000116535 783 ntBASIC9.52□□□□□ -0.89
Trim35Q8C006 Gm12135-201ENSMUST00000119170 466 ntBASIC9.52□□□□□ -0.89
Trim35Q8C006 Hmox2-203ENSMUST00000120232 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trim35Q8C006 Gm12464-201ENSMUST00000121385 1016 ntBASIC9.52□□□□□ -0.89
Trim35Q8C006 Gm13356-201ENSMUST00000121678 335 ntBASIC9.52□□□□□ -0.89
Trim35Q8C006 Gm14332-201ENSMUST00000121982 899 ntBASIC9.52□□□□□ -0.89
Trim35Q8C006 Gm12738-201ENSMUST00000122349 536 ntBASIC9.52□□□□□ -0.89
Trim35Q8C006 Gm5924-201ENSMUST00000132554 871 ntBASIC9.52□□□□□ -0.89
Trim35Q8C006 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trim35Q8C006 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC9.52□□□□□ -0.89
Trim35Q8C006 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trim35Q8C006 Gm23479-201ENSMUST00000158876 122 ntBASIC9.52□□□□□ -0.89
Trim35Q8C006 Tmbim6-205ENSMUST00000160635 871 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Trim35Q8C006 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Trim35Q8C006 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Trim35Q8C006 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Trim35Q8C006 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trim35Q8C006 Gm28666-201ENSMUST00000186649 274 ntBASIC9.52□□□□□ -0.89
Trim35Q8C006 Krtdap-206ENSMUST00000189962 323 ntTSL 3 BASIC9.52□□□□□ -0.89
Trim35Q8C006 Gm29605-201ENSMUST00000190800 292 ntBASIC9.52□□□□□ -0.89
Trim35Q8C006 Gm43711-201ENSMUST00000195994 373 ntBASIC9.52□□□□□ -0.89
Trim35Q8C006 Igkv4-83-201ENSMUST00000196933 334 ntBASIC9.52□□□□□ -0.89
Trim35Q8C006 Gm33167-201ENSMUST00000201933 2643 ntBASIC9.52□□□□□ -0.89
Trim35Q8C006 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC9.52□□□□□ -0.89
Trim35Q8C006 Gm44811-201ENSMUST00000209120 228 ntBASIC9.52□□□□□ -0.89
Trim35Q8C006 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trim35Q8C006 Gm45409-201ENSMUST00000211486 252 ntBASIC9.52□□□□□ -0.89
Trim35Q8C006 AC107851.1-201ENSMUST00000215982 417 ntTSL 2 BASIC9.52□□□□□ -0.89
Trim35Q8C006 AC154431.2-201ENSMUST00000225215 1055 ntBASIC9.52□□□□□ -0.89
Trim35Q8C006 Rpl14-ps1-201ENSMUST00000026901 653 ntBASIC9.52□□□□□ -0.89
Trim35Q8C006 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Trim35Q8C006 Zkscan1-202ENSMUST00000066617 8042 ntTSL 5 BASIC9.52□□□□□ -0.89
Trim35Q8C006 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Trim35Q8C006 Emc1-202ENSMUST00000082262 6226 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trim35Q8C006 Gm22229-201ENSMUST00000082987 108 ntBASIC9.52□□□□□ -0.89
Trim35Q8C006 Phactr4-203ENSMUST00000102568 4614 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trim35Q8C006 Casr-201ENSMUST00000063597 4534 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trim35Q8C006 Ccdc116-201ENSMUST00000023452 4210 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trim35Q8C006 Arhgap12-201ENSMUST00000062584 2718 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Trim35Q8C006 Olfr53-201ENSMUST00000084456 1328 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
Trim35Q8C006 Tec-202ENSMUST00000073843 2573 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trim35Q8C006 Gprc5c-202ENSMUST00000053361 3667 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trim35Q8C006 Hsd17b7-201ENSMUST00000027989 4612 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trim35Q8C006 Gm43511-201ENSMUST00000197084 2297 ntBASIC9.52□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms