Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm27299-201ENSMUST00000184593 103 ntBASIC5.91□□□□□ -1.46
Nkx3-1P97436 Gm27601-201ENSMUST00000184794 127 ntBASIC5.91□□□□□ -1.46
Nkx3-1P97436 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC5.91□□□□□ -1.46
Nkx3-1P97436 Gm19087-201ENSMUST00000191430 946 ntBASIC5.91□□□□□ -1.46
Nkx3-1P97436 Gm6077-201ENSMUST00000196008 499 ntBASIC5.91□□□□□ -1.46
Nkx3-1P97436 Gm43212-201ENSMUST00000198208 394 ntBASIC5.91□□□□□ -1.46
Nkx3-1P97436 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC5.91□□□□□ -1.46
Nkx3-1P97436 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Nkx3-1P97436 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC5.91□□□□□ -1.46
Nkx3-1P97436 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC5.91□□□□□ -1.46
Nkx3-1P97436 AC125064.1-201ENSMUST00000225801 295 ntBASIC5.91□□□□□ -1.46
Nkx3-1P97436 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Nkx3-1P97436 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Nkx3-1P97436 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Nkx3-1P97436 Mir135a-1-201ENSMUST00000083473 90 ntBASIC5.91□□□□□ -1.46
Nkx3-1P97436 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Nkx3-1P97436 AC164437.5-201ENSMUST00000227235 4414 ntBASIC5.91□□□□□ -1.46
Nkx3-1P97436 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Nkx3-1P97436 AC153143.1-201ENSMUST00000222966 1340 ntBASIC5.91□□□□□ -1.46
Nkx3-1P97436 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC5.91□□□□□ -1.46
Nkx3-1P97436 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Nkx3-1P97436 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Nkx3-1P97436 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Nkx3-1P97436 AC144772.2-201ENSMUST00000228830 2859 ntBASIC5.91□□□□□ -1.46
Nkx3-1P97436 Gm10650-202ENSMUST00000196581 1969 ntBASIC5.91□□□□□ -1.46
Nkx3-1P97436 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Nkx3-1P97436 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Nkx3-1P97436 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC5.91□□□□□ -1.46
Nkx3-1P97436 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Nkx3-1P97436 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Nkx3-1P97436 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
Nkx3-1P97436 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC5.9□□□□□ -1.46
Nkx3-1P97436 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Nkx3-1P97436 Gm1965-202ENSMUST00000161362 2405 ntTSL 2 BASIC5.9□□□□□ -1.46
Nkx3-1P97436 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Nkx3-1P97436 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
Nkx3-1P97436 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
Nkx3-1P97436 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Nkx3-1P97436 CT010470.1-201ENSMUST00000225364 1876 ntBASIC5.9□□□□□ -1.46
Nkx3-1P97436 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
Nkx3-1P97436 Ccnb2-ps-202ENSMUST00000170898 2296 ntBASIC5.9□□□□□ -1.46
Nkx3-1P97436 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Nkx3-1P97436 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC5.9□□□□□ -1.46
Nkx3-1P97436 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.46
Nkx3-1P97436 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
Nkx3-1P97436 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Nkx3-1P97436 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Nkx3-1P97436 Gm43128-201ENSMUST00000202212 1621 ntBASIC5.9□□□□□ -1.46
Nkx3-1P97436 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Nkx3-1P97436 Gm14772-201ENSMUST00000116562 514 ntBASIC5.9□□□□□ -1.46
Nkx3-1P97436 Gm9506-201ENSMUST00000118516 320 ntBASIC5.9□□□□□ -1.46
Nkx3-1P97436 Gm12242-201ENSMUST00000118824 738 ntBASIC5.9□□□□□ -1.46
Nkx3-1P97436 Gm7658-201ENSMUST00000119064 1124 ntBASIC5.9□□□□□ -1.46
Nkx3-1P97436 Gm13462-201ENSMUST00000121472 961 ntBASIC5.9□□□□□ -1.46
Nkx3-1P97436 Gm15696-201ENSMUST00000121730 445 ntBASIC5.9□□□□□ -1.46
Nkx3-1P97436 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Nkx3-1P97436 Gm5970-201ENSMUST00000131638 1216 ntBASIC5.9□□□□□ -1.46
Nkx3-1P97436 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC5.9□□□□□ -1.46
Nkx3-1P97436 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Nkx3-1P97436 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Nkx3-1P97436 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC5.9□□□□□ -1.46
Nkx3-1P97436 Gm11107-201ENSMUST00000165414 505 ntBASIC5.9□□□□□ -1.46
Nkx3-1P97436 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Nkx3-1P97436 Gm37689-201ENSMUST00000193139 275 ntBASIC5.9□□□□□ -1.46
Nkx3-1P97436 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC5.9□□□□□ -1.46
Nkx3-1P97436 Gm42443-201ENSMUST00000198084 1155 ntBASIC5.9□□□□□ -1.46
Nkx3-1P97436 Gm8190-201ENSMUST00000199603 586 ntBASIC5.9□□□□□ -1.46
Nkx3-1P97436 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC5.9□□□□□ -1.46
Nkx3-1P97436 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC5.9□□□□□ -1.46
Nkx3-1P97436 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC5.9□□□□□ -1.46
Nkx3-1P97436 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC5.9□□□□□ -1.46
Nkx3-1P97436 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC5.9□□□□□ -1.46
Nkx3-1P97436 Gm45693-201ENSMUST00000211391 1157 ntBASIC5.9□□□□□ -1.46
Nkx3-1P97436 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC5.9□□□□□ -1.46
Nkx3-1P97436 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Nkx3-1P97436 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC5.9□□□□□ -1.46
Nkx3-1P97436 Gm22351-201ENSMUST00000083925 107 ntBASIC5.9□□□□□ -1.46
Nkx3-1P97436 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Nkx3-1P97436 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Nkx3-1P97436 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Nkx3-1P97436 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Nkx3-1P97436 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Nkx3-1P97436 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Nkx3-1P97436 Gm10743-201ENSMUST00000219611 2358 ntBASIC5.9□□□□□ -1.46
Nkx3-1P97436 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Nkx3-1P97436 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Nkx3-1P97436 Gm4927-201ENSMUST00000219548 1318 ntBASIC5.9□□□□□ -1.47
Nkx3-1P97436 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Nkx3-1P97436 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Nkx3-1P97436 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
Nkx3-1P97436 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
Nkx3-1P97436 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Nkx3-1P97436 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Nkx3-1P97436 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
Nkx3-1P97436 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
Nkx3-1P97436 CT009480.2-201ENSMUST00000225152 3369 ntBASIC5.9□□□□□ -1.47
Nkx3-1P97436 Gm9877-201ENSMUST00000064271 2627 ntBASIC5.9□□□□□ -1.47
Nkx3-1P97436 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Nkx3-1P97436 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Nkx3-1P97436 Snhg17-209ENSMUST00000186993 3144 ntBASIC5.9□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms