Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Shmt1P50431 Gm5119-201ENSMUST00000215858 634 ntBASIC7.31□□□□□ -1.24
Shmt1P50431 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC7.31□□□□□ -1.24
Shmt1P50431 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Shmt1P50431 Gm2754-201ENSMUST00000223383 589 ntBASIC7.31□□□□□ -1.24
Shmt1P50431 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC7.31□□□□□ -1.24
Shmt1P50431 AC154618.2-201ENSMUST00000228299 452 ntBASIC7.31□□□□□ -1.24
Shmt1P50431 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Shmt1P50431 Gm24036-201ENSMUST00000082868 156 ntBASIC7.31□□□□□ -1.24
Shmt1P50431 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Shmt1P50431 Sult2a3-201ENSMUST00000098809 1018 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Shmt1P50431 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
Shmt1P50431 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Shmt1P50431 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Shmt1P50431 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
Shmt1P50431 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Shmt1P50431 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC7.31□□□□□ -1.24
Shmt1P50431 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC7.31□□□□□ -1.24
Shmt1P50431 Gm14762-201ENSMUST00000105109 1771 ntBASIC7.31□□□□□ -1.24
Shmt1P50431 Gm44553-201ENSMUST00000206316 2037 ntBASIC7.3□□□□□ -1.24
Shmt1P50431 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Shmt1P50431 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Shmt1P50431 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Shmt1P50431 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Shmt1P50431 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC7.3□□□□□ -1.24
Shmt1P50431 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Shmt1P50431 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Shmt1P50431 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
Shmt1P50431 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
Shmt1P50431 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC7.3□□□□□ -1.24
Shmt1P50431 Gm12713-201ENSMUST00000118404 764 ntBASIC7.3□□□□□ -1.24
Shmt1P50431 Gm14863-201ENSMUST00000119648 307 ntBASIC7.3□□□□□ -1.24
Shmt1P50431 Gm15103-201ENSMUST00000119893 871 ntBASIC7.3□□□□□ -1.24
Shmt1P50431 Gm5843-201ENSMUST00000121631 476 ntBASIC7.3□□□□□ -1.24
Shmt1P50431 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC7.3□□□□□ -1.24
Shmt1P50431 Gm18191-201ENSMUST00000174624 824 ntBASIC7.3□□□□□ -1.24
Shmt1P50431 Gm3307-201ENSMUST00000176164 632 ntBASIC7.3□□□□□ -1.24
Shmt1P50431 Esd-209ENSMUST00000177181 835 ntTSL 5 BASIC7.3□□□□□ -1.24
Shmt1P50431 Gm8192-201ENSMUST00000182196 958 ntBASIC7.3□□□□□ -1.24
Shmt1P50431 Gm9167-201ENSMUST00000182469 962 ntBASIC7.3□□□□□ -1.24
Shmt1P50431 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Shmt1P50431 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC7.3□□□□□ -1.24
Shmt1P50431 Gm29156-201ENSMUST00000187764 499 ntBASIC7.3□□□□□ -1.24
Shmt1P50431 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC7.3□□□□□ -1.24
Shmt1P50431 Gm18752-201ENSMUST00000192876 608 ntBASIC7.3□□□□□ -1.24
Shmt1P50431 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Shmt1P50431 Gm42673-201ENSMUST00000202676 337 ntBASIC7.3□□□□□ -1.24
Shmt1P50431 Gm44411-201ENSMUST00000204172 349 ntBASIC7.3□□□□□ -1.24
Shmt1P50431 Gm17822-201ENSMUST00000204307 351 ntBASIC7.3□□□□□ -1.24
Shmt1P50431 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC7.3□□□□□ -1.24
Shmt1P50431 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC7.3□□□□□ -1.24
Shmt1P50431 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC7.3□□□□□ -1.24
Shmt1P50431 AC069561.1-201ENSMUST00000213750 424 ntBASIC7.3□□□□□ -1.24
Shmt1P50431 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC7.3□□□□□ -1.24
Shmt1P50431 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC7.3□□□□□ -1.24
Shmt1P50431 AC150661.1-201ENSMUST00000222563 495 ntBASIC7.3□□□□□ -1.24
Shmt1P50431 AC163684.1-201ENSMUST00000223766 927 ntBASIC7.3□□□□□ -1.24
Shmt1P50431 AL645546.2-201ENSMUST00000224526 265 ntBASIC7.3□□□□□ -1.24
Shmt1P50431 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Shmt1P50431 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Shmt1P50431 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
Shmt1P50431 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Shmt1P50431 Gm37877-201ENSMUST00000191630 2709 ntBASIC7.3□□□□□ -1.24
Shmt1P50431 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC7.3□□□□□ -1.24
Shmt1P50431 Icos-202ENSMUST00000102827 3241 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Shmt1P50431 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Shmt1P50431 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Shmt1P50431 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Shmt1P50431 Gm15127-201ENSMUST00000101186 2026 ntAPPRIS P2 TSL 5 BASIC7.3□□□□□ -1.24
Shmt1P50431 Gm15091-201ENSMUST00000112740 2026 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Shmt1P50431 Gm15109-201ENSMUST00000133085 2026 ntBASIC7.3□□□□□ -1.24
Shmt1P50431 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Shmt1P50431 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Shmt1P50431 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Shmt1P50431 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Shmt1P50431 Gm39465-201ENSMUST00000213810 9813 ntTSL 3 BASIC7.3□□□□□ -1.24
Shmt1P50431 Gm11590-201ENSMUST00000118999 1455 ntBASIC7.3□□□□□ -1.24
Shmt1P50431 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC7.3□□□□□ -1.24
Shmt1P50431 Gm43789-201ENSMUST00000199275 2472 ntBASIC7.29□□□□□ -1.24
Shmt1P50431 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Shmt1P50431 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Shmt1P50431 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Shmt1P50431 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC7.29□□□□□ -1.24
Shmt1P50431 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Shmt1P50431 Dnajc18-201ENSMUST00000025208 5169 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Shmt1P50431 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Shmt1P50431 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Shmt1P50431 Serpinb1b-201ENSMUST00000016951 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Shmt1P50431 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Shmt1P50431 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Shmt1P50431 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Shmt1P50431 Irgm1-201ENSMUST00000049519 2259 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Shmt1P50431 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC7.29□□□□□ -1.24
Shmt1P50431 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Shmt1P50431 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Shmt1P50431 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Shmt1P50431 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Shmt1P50431 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Shmt1P50431 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Shmt1P50431 Gm15349-201ENSMUST00000121154 204 ntBASIC7.29□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms