Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Chmp6P0C0A3 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Chmp6P0C0A3 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
Chmp6P0C0A3 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Chmp6P0C0A3 Gm7690-201ENSMUST00000190885 1399 ntBASIC7.32□□□□□ -1.24
Chmp6P0C0A3 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Chmp6P0C0A3 AC154642.2-201ENSMUST00000223657 2485 ntBASIC7.32□□□□□ -1.24
Chmp6P0C0A3 Gm14245-201ENSMUST00000118939 1843 ntBASIC7.31□□□□□ -1.24
Chmp6P0C0A3 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
Chmp6P0C0A3 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Chmp6P0C0A3 Svs2-202ENSMUST00000109374 1479 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Chmp6P0C0A3 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC7.31□□□□□ -1.24
Chmp6P0C0A3 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Chmp6P0C0A3 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC7.31□□□□□ -1.24
Chmp6P0C0A3 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Chmp6P0C0A3 Gm45001-201ENSMUST00000208279 2515 ntBASIC7.31□□□□□ -1.24
Chmp6P0C0A3 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Chmp6P0C0A3 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Chmp6P0C0A3 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Chmp6P0C0A3 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Chmp6P0C0A3 Gm15712-201ENSMUST00000120369 1156 ntBASIC7.31□□□□□ -1.24
Chmp6P0C0A3 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Chmp6P0C0A3 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC7.31□□□□□ -1.24
Chmp6P0C0A3 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Chmp6P0C0A3 Gm9359-201ENSMUST00000163721 1221 ntBASIC7.31□□□□□ -1.24
Chmp6P0C0A3 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Chmp6P0C0A3 Gm21839-201ENSMUST00000179536 378 ntBASIC7.31□□□□□ -1.24
Chmp6P0C0A3 Gm25617-201ENSMUST00000179548 133 ntBASIC7.31□□□□□ -1.24
Chmp6P0C0A3 Mir7033-201ENSMUST00000184259 81 ntBASIC7.31□□□□□ -1.24
Chmp6P0C0A3 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC7.31□□□□□ -1.24
Chmp6P0C0A3 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC7.31□□□□□ -1.24
Chmp6P0C0A3 Gm19185-201ENSMUST00000196365 643 ntBASIC7.31□□□□□ -1.24
Chmp6P0C0A3 Gm43396-201ENSMUST00000197506 706 ntBASIC7.31□□□□□ -1.24
Chmp6P0C0A3 Gm25617-202ENSMUST00000198387 132 ntBASIC7.31□□□□□ -1.24
Chmp6P0C0A3 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC7.31□□□□□ -1.24
Chmp6P0C0A3 Gm30708-201ENSMUST00000202183 312 ntBASIC7.31□□□□□ -1.24
Chmp6P0C0A3 Gm21048-201ENSMUST00000202470 1166 ntBASIC7.31□□□□□ -1.24
Chmp6P0C0A3 Gm21054-201ENSMUST00000203981 380 ntBASIC7.31□□□□□ -1.24
Chmp6P0C0A3 Gm17822-201ENSMUST00000204307 351 ntBASIC7.31□□□□□ -1.24
Chmp6P0C0A3 Gm18559-201ENSMUST00000208249 604 ntBASIC7.31□□□□□ -1.24
Chmp6P0C0A3 AC153847.1-201ENSMUST00000214524 353 ntBASIC7.31□□□□□ -1.24
Chmp6P0C0A3 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC7.31□□□□□ -1.24
Chmp6P0C0A3 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Chmp6P0C0A3 AC161275.1-201ENSMUST00000224668 208 ntBASIC7.31□□□□□ -1.24
Chmp6P0C0A3 AC124450.1-201ENSMUST00000225569 495 ntBASIC7.31□□□□□ -1.24
Chmp6P0C0A3 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Chmp6P0C0A3 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Chmp6P0C0A3 Gm6419-201ENSMUST00000097166 429 ntBASIC7.31□□□□□ -1.24
Chmp6P0C0A3 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Chmp6P0C0A3 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Chmp6P0C0A3 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Chmp6P0C0A3 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC7.31□□□□□ -1.24
Chmp6P0C0A3 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
Chmp6P0C0A3 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
Chmp6P0C0A3 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Chmp6P0C0A3 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Chmp6P0C0A3 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Chmp6P0C0A3 Gm10568-201ENSMUST00000193244 1634 ntBASIC7.3□□□□□ -1.24
Chmp6P0C0A3 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC7.3□□□□□ -1.24
Chmp6P0C0A3 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC7.3□□□□□ -1.24
Chmp6P0C0A3 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Chmp6P0C0A3 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Chmp6P0C0A3 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Chmp6P0C0A3 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
Chmp6P0C0A3 Gm18451-201ENSMUST00000196759 1719 ntBASIC7.3□□□□□ -1.24
Chmp6P0C0A3 AC124680.1-201ENSMUST00000223923 1585 ntBASIC7.3□□□□□ -1.24
Chmp6P0C0A3 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Chmp6P0C0A3 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Chmp6P0C0A3 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Chmp6P0C0A3 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Chmp6P0C0A3 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC7.3□□□□□ -1.24
Chmp6P0C0A3 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Chmp6P0C0A3 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Chmp6P0C0A3 Gm2178-201ENSMUST00000104927 357 ntBASIC7.3□□□□□ -1.24
Chmp6P0C0A3 Gm12518-201ENSMUST00000122075 779 ntBASIC7.3□□□□□ -1.24
Chmp6P0C0A3 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Chmp6P0C0A3 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Chmp6P0C0A3 Gm25574-201ENSMUST00000175245 249 ntBASIC7.3□□□□□ -1.24
Chmp6P0C0A3 Gm8192-201ENSMUST00000182196 958 ntBASIC7.3□□□□□ -1.24
Chmp6P0C0A3 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Chmp6P0C0A3 Gm21301-201ENSMUST00000189476 699 ntBASIC7.3□□□□□ -1.24
Chmp6P0C0A3 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Chmp6P0C0A3 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
Chmp6P0C0A3 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Chmp6P0C0A3 Gm19764-201ENSMUST00000203630 649 ntBASIC7.3□□□□□ -1.24
Chmp6P0C0A3 Gm44892-201ENSMUST00000208595 488 ntBASIC7.3□□□□□ -1.24
Chmp6P0C0A3 Gm8168-201ENSMUST00000209631 948 ntBASIC7.3□□□□□ -1.24
Chmp6P0C0A3 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC7.3□□□□□ -1.24
Chmp6P0C0A3 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC7.3□□□□□ -1.24
Chmp6P0C0A3 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC7.3□□□□□ -1.24
Chmp6P0C0A3 Gm7252-201ENSMUST00000223284 456 ntBASIC7.3□□□□□ -1.24
Chmp6P0C0A3 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Chmp6P0C0A3 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Chmp6P0C0A3 AW822073-201ENSMUST00000075305 555 ntBASIC7.3□□□□□ -1.24
Chmp6P0C0A3 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC7.3□□□□□ -1.24
Chmp6P0C0A3 AC103672.2-201ENSMUST00000228146 1687 ntBASIC7.3□□□□□ -1.24
Chmp6P0C0A3 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Chmp6P0C0A3 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Chmp6P0C0A3 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Chmp6P0C0A3 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms