Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC8.1□□□□□ -1.11
Pde6bP23440 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC8.1□□□□□ -1.11
Pde6bP23440 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC8.1□□□□□ -1.11
Pde6bP23440 Gm44561-201ENSMUST00000208869 264 ntBASIC8.1□□□□□ -1.11
Pde6bP23440 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC8.1□□□□□ -1.11
Pde6bP23440 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Pde6bP23440 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC8.1□□□□□ -1.11
Pde6bP23440 AC162857.1-201ENSMUST00000226614 400 ntBASIC8.1□□□□□ -1.11
Pde6bP23440 Tex37-201ENSMUST00000063456 814 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Pde6bP23440 Prss58-201ENSMUST00000063523 979 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Pde6bP23440 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Pde6bP23440 Gpr15-201ENSMUST00000089318 1290 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Pde6bP23440 Gm10310-201ENSMUST00000095239 963 ntAPPRIS ALT2 BASIC8.1□□□□□ -1.11
Pde6bP23440 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC8.1□□□□□ -1.11
Pde6bP23440 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Pde6bP23440 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Pde6bP23440 Mmp27-201ENSMUST00000120900 1662 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Pde6bP23440 Ccdc60-201ENSMUST00000050178 3522 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Pde6bP23440 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Pde6bP23440 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC8.1□□□□□ -1.11
Pde6bP23440 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Pde6bP23440 Tcp10a-204ENSMUST00000138222 1838 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Pde6bP23440 Olfr1241-203ENSMUST00000215055 2441 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Pde6bP23440 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
Pde6bP23440 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Pde6bP23440 Gm37786-201ENSMUST00000191714 3225 ntBASIC8.1□□□□□ -1.11
Pde6bP23440 Gmeb1-203ENSMUST00000105965 4632 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Pde6bP23440 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Pde6bP23440 Gm19325-201ENSMUST00000186238 3382 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Pde6bP23440 Vcan-206ENSMUST00000159910 8332 ntTSL 5 BASIC8.1□□□□□ -1.11
Pde6bP23440 Tmem100-201ENSMUST00000092788 1767 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Pde6bP23440 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Pde6bP23440 Arhgap17-201ENSMUST00000098060 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Pde6bP23440 BB031773-201ENSMUST00000148892 3655 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Pde6bP23440 Osbpl9-201ENSMUST00000030288 2871 ntAPPRIS ALT1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Pde6bP23440 Gm44194-201ENSMUST00000204222 3229 ntBASIC8.09□□□□□ -1.11
Pde6bP23440 Oas1e-203ENSMUST00000201172 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Pde6bP23440 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Pde6bP23440 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Pde6bP23440 9530027J09Rik-201ENSMUST00000180584 1684 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Pde6bP23440 Olfr860-201ENSMUST00000086482 1686 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
Pde6bP23440 4933411E06Rik-201ENSMUST00000186016 1493 ntBASIC8.09□□□□□ -1.11
Pde6bP23440 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Pde6bP23440 Gm37078-201ENSMUST00000193314 2009 ntBASIC8.09□□□□□ -1.11
Pde6bP23440 Tdrkh-204ENSMUST00000196606 2586 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Pde6bP23440 Gm37510-201ENSMUST00000194151 4762 ntBASIC8.09□□□□□ -1.11
Pde6bP23440 Zbbx-201ENSMUST00000039269 2399 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Pde6bP23440 Gm23987-201ENSMUST00000117039 129 ntBASIC8.09□□□□□ -1.11
Pde6bP23440 Gm11318-201ENSMUST00000118640 961 ntBASIC8.09□□□□□ -1.11
Pde6bP23440 Olfr634-ps1-201ENSMUST00000119267 955 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Pde6bP23440 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC8.09□□□□□ -1.11
Pde6bP23440 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC8.09□□□□□ -1.11
Pde6bP23440 Gm15286-201ENSMUST00000150623 743 ntTSL 3 BASIC8.09□□□□□ -1.11
Pde6bP23440 Gm23007-201ENSMUST00000158951 177 ntBASIC8.09□□□□□ -1.11
Pde6bP23440 Gm16297-201ENSMUST00000161466 459 ntBASIC8.09□□□□□ -1.11
Pde6bP23440 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC8.09□□□□□ -1.11
Pde6bP23440 Gm20637-201ENSMUST00000175715 462 ntBASIC8.09□□□□□ -1.11
Pde6bP23440 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC8.09□□□□□ -1.11
Pde6bP23440 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC8.09□□□□□ -1.11
Pde6bP23440 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Pde6bP23440 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Pde6bP23440 Gm5103-201ENSMUST00000192081 1086 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Pde6bP23440 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Pde6bP23440 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC8.09□□□□□ -1.11
Pde6bP23440 Gm43346-201ENSMUST00000198290 685 ntTSL 2 BASIC8.09□□□□□ -1.11
Pde6bP23440 Gm18861-201ENSMUST00000202509 1186 ntBASIC8.09□□□□□ -1.11
Pde6bP23440 Gm45202-201ENSMUST00000205955 332 ntTSL 3 BASIC8.09□□□□□ -1.11
Pde6bP23440 Gm7419-201ENSMUST00000209962 925 ntBASIC8.09□□□□□ -1.11
Pde6bP23440 Ccl7-201ENSMUST00000021011 801 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Pde6bP23440 Gm45666-201ENSMUST00000211474 277 ntTSL 5 BASIC8.09□□□□□ -1.11
Pde6bP23440 Gm19170-201ENSMUST00000212440 1084 ntBASIC8.09□□□□□ -1.11
Pde6bP23440 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC8.09□□□□□ -1.11
Pde6bP23440 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC8.09□□□□□ -1.11
Pde6bP23440 Gm46124-202ENSMUST00000217260 860 ntTSL 5 BASIC8.09□□□□□ -1.11
Pde6bP23440 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC8.09□□□□□ -1.11
Pde6bP23440 AC140210.1-201ENSMUST00000224961 534 ntBASIC8.09□□□□□ -1.11
Pde6bP23440 AC102676.1-201ENSMUST00000228131 719 ntBASIC8.09□□□□□ -1.11
Pde6bP23440 AC114916.1-201ENSMUST00000228465 494 ntBASIC8.09□□□□□ -1.11
Pde6bP23440 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Pde6bP23440 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Pde6bP23440 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Pde6bP23440 Gm22575-201ENSMUST00000082981 110 ntBASIC8.09□□□□□ -1.11
Pde6bP23440 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Pde6bP23440 Gm37326-201ENSMUST00000192828 3071 ntBASIC8.09□□□□□ -1.11
Pde6bP23440 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Pde6bP23440 Olfr669-203ENSMUST00000214260 2336 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Pde6bP23440 Wdr72-205ENSMUST00000215440 5160 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Pde6bP23440 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC8.09□□□□□ -1.11
Pde6bP23440 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Pde6bP23440 Gm10258-201ENSMUST00000091270 2123 ntBASIC8.09□□□□□ -1.11
Pde6bP23440 Adgrl2-212ENSMUST00000198779 4592 ntTSL 5 BASIC8.09□□□□□ -1.11
Pde6bP23440 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Pde6bP23440 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Pde6bP23440 Chm-201ENSMUST00000026607 4868 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Pde6bP23440 Dsc3-203ENSMUST00000225110 3123 ntAPPRIS P2 BASIC8.09□□□□□ -1.11
Pde6bP23440 AC107740.1-201ENSMUST00000216972 2401 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Pde6bP23440 AC156645.1-201ENSMUST00000223066 5194 ntBASIC8.09□□□□□ -1.11
Pde6bP23440 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Pde6bP23440 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.12
Pde6bP23440 Ankrd55-203ENSMUST00000165593 2749 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms