Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC6.46□□□□□ -1.38
Col6a3E9PWQ3 AC122426.1-201ENSMUST00000214736 2235 ntBASIC6.46□□□□□ -1.38
Col6a3E9PWQ3 Scn8a-213ENSMUST00000201549 7120 ntAPPRIS P5 TSL 5 BASIC6.46□□□□□ -1.38
Col6a3E9PWQ3 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC6.46□□□□□ -1.38
Col6a3E9PWQ3 Olfr466-202ENSMUST00000214214 4192 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Col6a3E9PWQ3 Gm43681-201ENSMUST00000201581 1903 ntBASIC6.46□□□□□ -1.38
Col6a3E9PWQ3 Olfm3-202ENSMUST00000081752 4647 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Col6a3E9PWQ3 Gm8545-201ENSMUST00000120692 801 ntBASIC6.46□□□□□ -1.38
Col6a3E9PWQ3 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Col6a3E9PWQ3 Mir7062-201ENSMUST00000185038 66 ntBASIC6.46□□□□□ -1.38
Col6a3E9PWQ3 Gm43524-201ENSMUST00000197278 298 ntBASIC6.46□□□□□ -1.38
Col6a3E9PWQ3 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Col6a3E9PWQ3 CT030170.4-202ENSMUST00000221109 540 ntBASIC6.46□□□□□ -1.38
Col6a3E9PWQ3 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Col6a3E9PWQ3 Gm11872-201ENSMUST00000141819 2219 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Col6a3E9PWQ3 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Col6a3E9PWQ3 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Col6a3E9PWQ3 Gm37984-201ENSMUST00000191641 3733 ntBASIC6.46□□□□□ -1.38
Col6a3E9PWQ3 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Col6a3E9PWQ3 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC6.46□□□□□ -1.38
Col6a3E9PWQ3 Rest-201ENSMUST00000080359 7004 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Col6a3E9PWQ3 Vmn1r50-203ENSMUST00000226577 2240 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Col6a3E9PWQ3 Cep95-201ENSMUST00000018516 2696 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
Col6a3E9PWQ3 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC6.46□□□□□ -1.38
Col6a3E9PWQ3 Ppip5k1-201ENSMUST00000052029 5533 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Col6a3E9PWQ3 Gm25487-201ENSMUST00000158725 125 ntBASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 Gm6119-201ENSMUST00000193443 1206 ntBASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 CT009713.5-201ENSMUST00000224508 909 ntBASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 Sec16b-201ENSMUST00000027881 4414 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 Lyve1-201ENSMUST00000033050 2893 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 Gm28112-201ENSMUST00000190898 1875 ntBASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 Vps39-201ENSMUST00000028752 4339 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 Gm20523-201ENSMUST00000174340 1124 ntBASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 Gm8863-201ENSMUST00000216630 926 ntBASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 AC159979.1-201ENSMUST00000227927 342 ntBASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 Mir17-201ENSMUST00000083574 84 ntBASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 Gm7337-202ENSMUST00000181439 2655 ntBASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 Dclre1b-201ENSMUST00000029435 4345 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 Tgm3-201ENSMUST00000110299 4135 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 Gm38315-201ENSMUST00000194286 2437 ntBASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 Rgs8-203ENSMUST00000111812 3625 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 Gp1ba-202ENSMUST00000108551 2480 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 Zfp825-202ENSMUST00000202645 1406 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 Ctnna2-202ENSMUST00000159626 3908 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 Myo18a-209ENSMUST00000108376 7374 ntTSL 5 BASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 Gm15171-201ENSMUST00000122191 334 ntBASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 Gm14613-201ENSMUST00000122239 752 ntBASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 1700123O12Rik-202ENSMUST00000141312 660 ntTSL 3 BASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 Gm37725-201ENSMUST00000193965 2125 ntBASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 Gm42767-201ENSMUST00000198583 632 ntBASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 Gm44503-201ENSMUST00000149692 4383 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 Gm38387-201ENSMUST00000191945 2577 ntBASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 Prdx6b-201ENSMUST00000057072 2885 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Col6a3E9PWQ3 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Ccser1-201ENSMUST00000045522 2688 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Zfp661-203ENSMUST00000110368 2981 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Gm37238-201ENSMUST00000195552 2390 ntBASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Gm14115-201ENSMUST00000119242 482 ntBASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 H3f3c-201ENSMUST00000119459 411 ntBASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Mir3078-201ENSMUST00000175231 87 ntBASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Gm21816-201ENSMUST00000179255 360 ntBASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 Gm37328-201ENSMUST00000193191 640 ntBASIC6.44□□□□□ -1.38
Col6a3E9PWQ3 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms