Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Rasef-202ENSMUST00000102837 5158 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a4A2AX52 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Col6a4A2AX52 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a4A2AX52 Gm45073-201ENSMUST00000207688 4247 ntBASIC5.71□□□□□ -1.5
Col6a4A2AX52 Gm28839-201ENSMUST00000189579 2171 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a4A2AX52 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Col6a4A2AX52 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC5.71□□□□□ -1.5
Col6a4A2AX52 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a4A2AX52 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC5.71□□□□□ -1.5
Col6a4A2AX52 Gm13237-201ENSMUST00000122151 635 ntBASIC5.71□□□□□ -1.5
Col6a4A2AX52 Gm22275-201ENSMUST00000122470 310 ntBASIC5.71□□□□□ -1.5
Col6a4A2AX52 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a4A2AX52 Gm26211-201ENSMUST00000158578 129 ntBASIC5.71□□□□□ -1.5
Col6a4A2AX52 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a4A2AX52 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a4A2AX52 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC5.71□□□□□ -1.5
Col6a4A2AX52 Mir6906-201ENSMUST00000198998 58 ntBASIC5.71□□□□□ -1.5
Col6a4A2AX52 AC140930.1-201ENSMUST00000221889 389 ntBASIC5.71□□□□□ -1.5
Col6a4A2AX52 AC154573.2-201ENSMUST00000224174 378 ntBASIC5.71□□□□□ -1.5
Col6a4A2AX52 FAM237A-201ENSMUST00000226288 1105 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Col6a4A2AX52 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a4A2AX52 Gm8526-201ENSMUST00000079153 475 ntBASIC5.71□□□□□ -1.5
Col6a4A2AX52 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a4A2AX52 Olfr1012-201ENSMUST00000099916 936 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Col6a4A2AX52 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a4A2AX52 Apobec1-203ENSMUST00000112587 2072 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Col6a4A2AX52 Gm43497-201ENSMUST00000201137 2316 ntBASIC5.71□□□□□ -1.5
Col6a4A2AX52 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a4A2AX52 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a4A2AX52 B020004J07Rik-202ENSMUST00000106919 1976 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a4A2AX52 Gm28824-201ENSMUST00000187496 2167 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a4A2AX52 Gm28948-201ENSMUST00000188447 2167 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a4A2AX52 Gm29472-201ENSMUST00000188599 2167 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a4A2AX52 Gm28561-201ENSMUST00000189366 2167 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a4A2AX52 Gm28732-201ENSMUST00000189632 2167 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a4A2AX52 Gm38136-201ENSMUST00000194775 2167 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a4A2AX52 Gm38296-201ENSMUST00000195205 2167 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a4A2AX52 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Col6a4A2AX52 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a4A2AX52 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Col6a4A2AX52 Ccdc60-201ENSMUST00000050178 3522 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a4A2AX52 Gm37877-201ENSMUST00000191630 2709 ntBASIC5.7□□□□□ -1.5
Col6a4A2AX52 Vmn1r50-203ENSMUST00000226577 2240 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Col6a4A2AX52 Gm26557-201ENSMUST00000180756 493 ntBASIC5.7□□□□□ -1.5
Col6a4A2AX52 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC5.7□□□□□ -1.5
Col6a4A2AX52 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a4A2AX52 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC5.7□□□□□ -1.5
Col6a4A2AX52 Gm45432-201ENSMUST00000210391 416 ntBASIC5.7□□□□□ -1.5
Col6a4A2AX52 AC112956.1-201ENSMUST00000213563 492 ntBASIC5.7□□□□□ -1.5
Col6a4A2AX52 Gm5055-201ENSMUST00000215697 581 ntBASIC5.7□□□□□ -1.5
Col6a4A2AX52 Olfr1173-202ENSMUST00000216887 5363 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Col6a4A2AX52 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC5.7□□□□□ -1.5
Col6a4A2AX52 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC5.7□□□□□ -1.5
Col6a4A2AX52 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC5.7□□□□□ -1.5
Col6a4A2AX52 AC171003.1-201ENSMUST00000221667 1665 ntBASIC5.7□□□□□ -1.5
Col6a4A2AX52 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a4A2AX52 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a4A2AX52 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
Col6a4A2AX52 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a4A2AX52 Irgm1-201ENSMUST00000049519 2259 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a4A2AX52 Thg1l-202ENSMUST00000109254 2202 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a4A2AX52 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a4A2AX52 Frrs1-202ENSMUST00000195905 6823 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Col6a4A2AX52 Extl2-203ENSMUST00000106502 2840 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a4A2AX52 Rnf24-204ENSMUST00000165420 5833 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
Col6a4A2AX52 Ehbp1-207ENSMUST00000180360 4971 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
Col6a4A2AX52 Bbs12-202ENSMUST00000108121 2348 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a4A2AX52 Gm37465-201ENSMUST00000192845 3290 ntBASIC5.7□□□□□ -1.5
Col6a4A2AX52 Mir760-201ENSMUST00000103257 119 ntBASIC5.7□□□□□ -1.5
Col6a4A2AX52 Gm12402-201ENSMUST00000120536 334 ntBASIC5.7□□□□□ -1.5
Col6a4A2AX52 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC5.7□□□□□ -1.5
Col6a4A2AX52 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC5.7□□□□□ -1.5
Col6a4A2AX52 Gm46203-201ENSMUST00000218130 478 ntBASIC5.7□□□□□ -1.5
Col6a4A2AX52 AC164426.1-201ENSMUST00000225745 929 ntBASIC5.7□□□□□ -1.5
Col6a4A2AX52 Mir135a-1-201ENSMUST00000083473 90 ntBASIC5.7□□□□□ -1.5
Col6a4A2AX52 Gm45182-201ENSMUST00000207579 2404 ntBASIC5.7□□□□□ -1.5
Col6a4A2AX52 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a4A2AX52 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a4A2AX52 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a4A2AX52 Gm37648-201ENSMUST00000192072 2563 ntBASIC5.7□□□□□ -1.5
Col6a4A2AX52 Fchsd2-201ENSMUST00000032931 4453 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a4A2AX52 Mast4-201ENSMUST00000099202 7709 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Col6a4A2AX52 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Col6a4A2AX52 Adcy10-202ENSMUST00000111439 5193 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Col6a4A2AX52 Gm16123-201ENSMUST00000118647 1517 ntBASIC5.69□□□□□ -1.5
Col6a4A2AX52 Gm9521-201ENSMUST00000206656 1516 ntBASIC5.69□□□□□ -1.5
Col6a4A2AX52 Rad51b-203ENSMUST00000218039 2187 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Col6a4A2AX52 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Col6a4A2AX52 Farsb-201ENSMUST00000068333 1951 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a4A2AX52 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a4A2AX52 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a4A2AX52 Gm8424-201ENSMUST00000117716 988 ntBASIC5.69□□□□□ -1.5
Col6a4A2AX52 Gm6977-201ENSMUST00000121568 512 ntBASIC5.69□□□□□ -1.5
Col6a4A2AX52 Gm23674-201ENSMUST00000157473 131 ntBASIC5.69□□□□□ -1.5
Col6a4A2AX52 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a4A2AX52 Mir6952-201ENSMUST00000185092 61 ntBASIC5.69□□□□□ -1.5
Col6a4A2AX52 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Col6a4A2AX52 Gm36939-201ENSMUST00000194889 439 ntBASIC5.69□□□□□ -1.5
Col6a4A2AX52 Gm42886-201ENSMUST00000199214 466 ntBASIC5.69□□□□□ -1.5
Col6a4A2AX52 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC5.69□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms