Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm7731-201ENSMUST00000091759 470 ntBASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 CT009757.4-201ENSMUST00000221520 2541 ntBASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Gm5512-202ENSMUST00000220222 1522 ntBASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
Ccdc9Q8VC31 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC8.12□□□□□ -1.11
Ccdc9Q8VC31 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc9Q8VC31 Gm5949-201ENSMUST00000213468 1421 ntBASIC8.12□□□□□ -1.11
Ccdc9Q8VC31 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc9Q8VC31 Gm6767-201ENSMUST00000118650 1381 ntBASIC8.12□□□□□ -1.11
Ccdc9Q8VC31 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc9Q8VC31 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Ccdc9Q8VC31 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc9Q8VC31 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Ccdc9Q8VC31 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Ccdc9Q8VC31 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc9Q8VC31 1700060C20Rik-201ENSMUST00000109506 605 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc9Q8VC31 Gm22710-201ENSMUST00000116892 125 ntBASIC8.12□□□□□ -1.11
Ccdc9Q8VC31 Defa33-201ENSMUST00000120874 426 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc9Q8VC31 Gm11258-201ENSMUST00000121086 1218 ntBASIC8.12□□□□□ -1.11
Ccdc9Q8VC31 Gm26408-201ENSMUST00000157672 127 ntBASIC8.12□□□□□ -1.11
Ccdc9Q8VC31 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Ccdc9Q8VC31 Defa2-201ENSMUST00000170275 426 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc9Q8VC31 Anks1b-209ENSMUST00000182083 416 ntTSL 2 BASIC8.12□□□□□ -1.11
Ccdc9Q8VC31 Mir6922-201ENSMUST00000185099 66 ntBASIC8.12□□□□□ -1.11
Ccdc9Q8VC31 Gm38047-201ENSMUST00000193690 1133 ntBASIC8.12□□□□□ -1.11
Ccdc9Q8VC31 Mir1897-202ENSMUST00000198006 79 ntBASIC8.12□□□□□ -1.11
Ccdc9Q8VC31 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC8.12□□□□□ -1.11
Ccdc9Q8VC31 Gm44140-201ENSMUST00000204157 675 ntTSL 3 BASIC8.12□□□□□ -1.11
Ccdc9Q8VC31 Gm45156-201ENSMUST00000207255 439 ntBASIC8.12□□□□□ -1.11
Ccdc9Q8VC31 Il15-203ENSMUST00000209573 1164 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Ccdc9Q8VC31 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC8.12□□□□□ -1.11
Ccdc9Q8VC31 Gm46323-201ENSMUST00000223136 628 ntTSL 5 BASIC8.12□□□□□ -1.11
Ccdc9Q8VC31 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Ccdc9Q8VC31 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc9Q8VC31 Zfp935-202ENSMUST00000221747 2492 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc9Q8VC31 AC107232.1-201ENSMUST00000227785 1503 ntBASIC8.12□□□□□ -1.11
Ccdc9Q8VC31 Ttc39d-202ENSMUST00000134652 2438 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
Ccdc9Q8VC31 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc9Q8VC31 AC137871.4-201ENSMUST00000226323 3901 ntBASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 Phf7-206ENSMUST00000228437 1373 ntBASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 Gm10259-201ENSMUST00000091289 1590 ntBASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 Gm18248-201ENSMUST00000191164 1846 ntBASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 Pilrb1-201ENSMUST00000110978 1020 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 Gm13566-201ENSMUST00000117428 1142 ntBASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 Gm13338-201ENSMUST00000120235 361 ntBASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 Snhg12-203ENSMUST00000128131 614 ntTSL 2 BASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 6430503K07Rik-201ENSMUST00000144411 476 ntTSL 2 BASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 Traj54-201ENSMUST00000165071 54 ntBASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 Gm4781-201ENSMUST00000167995 781 ntBASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 Lgals1-ps2-201ENSMUST00000170221 519 ntBASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 Gm7678-201ENSMUST00000181879 943 ntBASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 Gm4891-201ENSMUST00000182279 912 ntBASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 Gm9149-201ENSMUST00000182724 1007 ntBASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 Gm5272-201ENSMUST00000182730 982 ntBASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 Scgb2b12-201ENSMUST00000183195 511 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 Gm20587-201ENSMUST00000186367 1186 ntBASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 Mllt11-202ENSMUST00000196025 624 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 Gm31305-201ENSMUST00000198557 710 ntTSL 3 BASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 Mrps33-204ENSMUST00000201461 717 ntTSL 2 BASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 Gm40304-201ENSMUST00000202154 268 ntTSL 3 BASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 Gm44243-201ENSMUST00000204323 692 ntBASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 Gm30692-201ENSMUST00000208709 801 ntTSL 5 BASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 Rpl32l-201ENSMUST00000216127 399 ntBASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 AC163296.1-202ENSMUST00000218395 661 ntBASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 AC163296.1-201ENSMUST00000220004 1266 ntBASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 Gm33684-201ENSMUST00000221119 263 ntTSL 3 BASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 Gm4804-203ENSMUST00000222542 577 ntTSL 3 BASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 CT030170.6-202ENSMUST00000223186 544 ntBASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 AC165260.3-201ENSMUST00000225101 665 ntBASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 AC131029.2-203ENSMUST00000228116 1244 ntBASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 1700024P04Rik-201ENSMUST00000054425 481 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 4930563M21Rik-201ENSMUST00000060468 792 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 Vpreb2-201ENSMUST00000075371 429 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 Gm28392-201ENSMUST00000077630 393 ntBASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 Gm8882-201ENSMUST00000080849 1240 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 Gm42781-201ENSMUST00000201317 2719 ntBASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC8.11□□□□□ -1.11
Ccdc9Q8VC31 Gm2108-201ENSMUST00000165058 2177 ntBASIC8.11□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms