Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 AC165260.6-206ENSMUST00000223884 3698 ntBASIC7.9□□□□□ -1.14
Ddx55Q6ZPL9 6530403H02Rik-202ENSMUST00000182124 3191 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Ddx55Q6ZPL9 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC7.9□□□□□ -1.15
Ddx55Q6ZPL9 Adgrl4-201ENSMUST00000046977 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Ddx55Q6ZPL9 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Ddx55Q6ZPL9 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
Ddx55Q6ZPL9 Gm29364-201ENSMUST00000185289 2167 ntTSL 5 BASIC7.9□□□□□ -1.15
Ddx55Q6ZPL9 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
Ddx55Q6ZPL9 Gm28109-201ENSMUST00000189979 2167 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
Ddx55Q6ZPL9 Gm29446-201ENSMUST00000190887 2166 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
Ddx55Q6ZPL9 Gm37948-201ENSMUST00000192846 2169 ntTSL 5 BASIC7.9□□□□□ -1.15
Ddx55Q6ZPL9 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.15
Ddx55Q6ZPL9 Gm17137-201ENSMUST00000164106 4371 ntBASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 Slc6a18-203ENSMUST00000109680 4052 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 Srcap-214ENSMUST00000190390 9633 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 Ptk2b-208ENSMUST00000178730 3863 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 Slfn9-201ENSMUST00000038211 5769 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 AC121286.2-201ENSMUST00000218069 2470 ntBASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 Gm38386-201ENSMUST00000194293 3421 ntBASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 1110008L16Rik-205ENSMUST00000184766 2250 ntAPPRIS P2 TSL 5 BASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 Gm37937-201ENSMUST00000194130 2168 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 Gm5319-201ENSMUST00000118965 873 ntBASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 Gm23426-201ENSMUST00000122483 318 ntBASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 Gm25219-201ENSMUST00000157545 330 ntBASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 Gm24687-201ENSMUST00000157758 241 ntBASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 Gm8919-201ENSMUST00000182028 1014 ntBASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 9930111H07Rik-201ENSMUST00000187270 821 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 Gm28745-201ENSMUST00000190069 305 ntBASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 Gm38384-201ENSMUST00000195413 1122 ntBASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 Gm20239-201ENSMUST00000196610 982 ntBASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 Igkv4-73-201ENSMUST00000199760 358 ntBASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 Gm44607-201ENSMUST00000205611 1090 ntBASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 Gm18377-201ENSMUST00000215141 607 ntBASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 Gm5831-201ENSMUST00000216016 1209 ntBASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 Gm2139-201ENSMUST00000222569 1075 ntBASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 AC102139.1-201ENSMUST00000227000 251 ntBASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 AC123656.1-201ENSMUST00000227121 581 ntBASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 Gm5426-201ENSMUST00000074615 312 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 Gm6436-201ENSMUST00000077163 451 ntBASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 Gm21731-201ENSMUST00000079524 489 ntBASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 n-R5s97-201ENSMUST00000082585 113 ntBASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 Med12l-202ENSMUST00000040325 10159 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 Gm37499-201ENSMUST00000194683 3478 ntBASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 Gm37745-201ENSMUST00000193304 8163 ntBASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 Gm43254-201ENSMUST00000199187 2491 ntBASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 Olfr1259-202ENSMUST00000214846 4325 ntAPPRIS P1 TSL 3 BASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC7.89□□□□□ -1.15
Ddx55Q6ZPL9 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 Gm4951-201ENSMUST00000031549 2645 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 Gm42771-201ENSMUST00000198342 2486 ntBASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 Gmeb1-203ENSMUST00000105965 4632 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 Gm13301-201ENSMUST00000121728 2446 ntBASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 Olfr1122-202ENSMUST00000215371 5036 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 A330058E17Rik-201ENSMUST00000200757 3890 ntBASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 Rnu11-201ENSMUST00000104135 134 ntBASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 Gm14580-201ENSMUST00000119122 718 ntBASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 Gm14746-201ENSMUST00000120309 741 ntBASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 Gm14776-201ENSMUST00000121029 887 ntBASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 Gm15061-201ENSMUST00000121076 1046 ntBASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 Gm6977-201ENSMUST00000121568 512 ntBASIC7.88□□□□□ -1.15
Ddx55Q6ZPL9 Gm12438-201ENSMUST00000122034 336 ntBASIC7.88□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 114.8 ms