Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Matr3-215ENSMUST00000190121 2638 ntTSL 5 BASIC6.81□□□□□ -1.32
Usp39Q3TIX9 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Gm37953-201ENSMUST00000195293 1884 ntBASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Gm28379-202ENSMUST00000187676 2896 ntBASIC6.81□□□□□ -1.32
Usp39Q3TIX9 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Gm25396-201ENSMUST00000103981 133 ntBASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Gm25757-201ENSMUST00000103986 123 ntBASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Gm14745-201ENSMUST00000118480 1096 ntBASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Gm15129-201ENSMUST00000119673 279 ntBASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Gm13940-201ENSMUST00000121023 301 ntBASIC6.81□□□□□ -1.32
Usp39Q3TIX9 A330102I10Rik-201ENSMUST00000130109 501 ntTSL 2 BASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Gm16571-201ENSMUST00000159112 291 ntBASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Usp39Q3TIX9 1700112H15Rik-201ENSMUST00000188766 778 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Gm19214-201ENSMUST00000191956 1083 ntBASIC6.81□□□□□ -1.32
Usp39Q3TIX9 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Gm38283-201ENSMUST00000193041 695 ntBASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Gm5050-201ENSMUST00000197164 775 ntBASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Gm10416-201ENSMUST00000197379 645 ntBASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Gm42752-201ENSMUST00000198394 1106 ntBASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Usp39Q3TIX9 4930425L21Rik-202ENSMUST00000205073 871 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Usp39Q3TIX9 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC6.81□□□□□ -1.32
Usp39Q3TIX9 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Gm7712-201ENSMUST00000222214 337 ntTSL 5 BASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Gm36758-201ENSMUST00000222594 310 ntBASIC6.81□□□□□ -1.32
Usp39Q3TIX9 AV026068-219ENSMUST00000224148 933 ntBASIC6.81□□□□□ -1.32
Usp39Q3TIX9 AV026068-229ENSMUST00000225516 595 ntBASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Gm24919-201ENSMUST00000083020 106 ntBASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Olfr1416-201ENSMUST00000086837 939 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Gm6640-201ENSMUST00000120629 1587 ntBASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Meiob-201ENSMUST00000024972 1703 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Usp39Q3TIX9 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Usp39Q3TIX9 Gm44704-201ENSMUST00000208963 1990 ntBASIC6.8□□□□□ -1.32
Usp39Q3TIX9 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Usp39Q3TIX9 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Usp39Q3TIX9 Gm45172-201ENSMUST00000206054 1301 ntBASIC6.8□□□□□ -1.32
Usp39Q3TIX9 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Usp39Q3TIX9 AC131068.3-201ENSMUST00000228438 1456 ntBASIC6.8□□□□□ -1.32
Usp39Q3TIX9 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Usp39Q3TIX9 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Usp39Q3TIX9 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Usp39Q3TIX9 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC6.8□□□□□ -1.32
Usp39Q3TIX9 Gm24869-201ENSMUST00000104072 128 ntBASIC6.8□□□□□ -1.32
Usp39Q3TIX9 Gm22671-201ENSMUST00000104420 134 ntBASIC6.8□□□□□ -1.32
Usp39Q3TIX9 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Usp39Q3TIX9 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Usp39Q3TIX9 Gm13444-201ENSMUST00000119445 522 ntBASIC6.8□□□□□ -1.32
Usp39Q3TIX9 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
Usp39Q3TIX9 Gm13341-201ENSMUST00000120780 672 ntBASIC6.8□□□□□ -1.32
Usp39Q3TIX9 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC6.8□□□□□ -1.32
Usp39Q3TIX9 Gm23276-201ENSMUST00000157913 138 ntBASIC6.8□□□□□ -1.32
Usp39Q3TIX9 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC6.8□□□□□ -1.32
Usp39Q3TIX9 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Usp39Q3TIX9 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Usp39Q3TIX9 Gm23164-201ENSMUST00000175084 111 ntBASIC6.8□□□□□ -1.32
Usp39Q3TIX9 Esd-203ENSMUST00000175887 809 ntTSL 5 BASIC6.8□□□□□ -1.32
Usp39Q3TIX9 Gm3307-201ENSMUST00000176164 632 ntBASIC6.8□□□□□ -1.32
Usp39Q3TIX9 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Usp39Q3TIX9 Gm27039-201ENSMUST00000182438 962 ntBASIC6.8□□□□□ -1.32
Usp39Q3TIX9 Gm20574-201ENSMUST00000182867 917 ntBASIC6.8□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 121.7 ms