Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC6.48□□□□□ -1.37
Col6a3E9PWQ3 Gm9321-201ENSMUST00000221179 778 ntBASIC6.48□□□□□ -1.37
Col6a3E9PWQ3 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a3E9PWQ3 Ap5m1-208ENSMUST00000228238 3514 ntBASIC6.48□□□□□ -1.37
Col6a3E9PWQ3 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a3E9PWQ3 Gm42507-201ENSMUST00000201187 2555 ntBASIC6.48□□□□□ -1.37
Col6a3E9PWQ3 Gm28333-201ENSMUST00000186034 2168 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a3E9PWQ3 Gm28561-201ENSMUST00000189366 2167 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a3E9PWQ3 Gm28732-201ENSMUST00000189632 2167 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a3E9PWQ3 Gm28315-201ENSMUST00000189948 2168 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a3E9PWQ3 Gm37547-201ENSMUST00000193277 2165 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a3E9PWQ3 Gm38136-201ENSMUST00000194775 2167 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a3E9PWQ3 Gm38296-201ENSMUST00000195205 2167 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a3E9PWQ3 Sept6-201ENSMUST00000053456 4673 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a3E9PWQ3 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a3E9PWQ3 Stat1-206ENSMUST00000186857 4241 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a3E9PWQ3 Ncor1-202ENSMUST00000037575 4246 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a3E9PWQ3 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a3E9PWQ3 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a3E9PWQ3 Pknox2-202ENSMUST00000080754 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a3E9PWQ3 Tacc2-202ENSMUST00000059145 3906 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 Chrm2-202ENSMUST00000172278 5676 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 Gm24469-201ENSMUST00000104487 131 ntBASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 Gm43946-201ENSMUST00000204058 886 ntBASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 AC154461.5-201ENSMUST00000225429 774 ntBASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 Atp6v1a-202ENSMUST00000114666 4234 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 AC125409.2-201ENSMUST00000221888 2158 ntBASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 AC153152.1-201ENSMUST00000221105 2742 ntBASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 n-R5s24-201ENSMUST00000122518 117 ntBASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 Gm23280-201ENSMUST00000157905 139 ntBASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 Gm17198-201ENSMUST00000171792 1154 ntBASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 Gm37908-201ENSMUST00000195828 470 ntBASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 AC157515.1-201ENSMUST00000220953 450 ntBASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 Kalrn-212ENSMUST00000114973 5253 ntTSL 5 BASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 Brip1os-201ENSMUST00000128960 4423 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 AC156025.3-201ENSMUST00000225919 3095 ntBASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 Mbtd1-205ENSMUST00000107853 5245 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 Zfp790-201ENSMUST00000032796 3376 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 Farsb-201ENSMUST00000068333 1951 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 Gm8669-201ENSMUST00000183839 945 ntBASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 Gm4854-201ENSMUST00000185902 574 ntBASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 Gm7890-201ENSMUST00000204877 601 ntBASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 Calcr-202ENSMUST00000115622 3721 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 Zfyve16-201ENSMUST00000022217 6150 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Col6a3E9PWQ3 AC122357.3-201ENSMUST00000221260 2293 ntBASIC6.46□□□□□ -1.37
Col6a3E9PWQ3 Havcr1-202ENSMUST00000081819 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
Col6a3E9PWQ3 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC6.46□□□□□ -1.37
Col6a3E9PWQ3 Gm26984-201ENSMUST00000182345 3510 ntBASIC6.46□□□□□ -1.37
Col6a3E9PWQ3 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Col6a3E9PWQ3 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
Col6a3E9PWQ3 Gm38697-201ENSMUST00000198061 1746 ntBASIC6.46□□□□□ -1.37
Col6a3E9PWQ3 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC6.46□□□□□ -1.37
Col6a3E9PWQ3 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC6.46□□□□□ -1.37
Col6a3E9PWQ3 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC6.46□□□□□ -1.37
Col6a3E9PWQ3 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC6.46□□□□□ -1.37
Col6a3E9PWQ3 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC6.46□□□□□ -1.37
Col6a3E9PWQ3 Gm20545-201ENSMUST00000174739 210 ntBASIC6.46□□□□□ -1.37
Col6a3E9PWQ3 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC6.46□□□□□ -1.37
Col6a3E9PWQ3 Gm4548-201ENSMUST00000208487 509 ntBASIC6.46□□□□□ -1.37
Col6a3E9PWQ3 AC158955.1-201ENSMUST00000227140 385 ntBASIC6.46□□□□□ -1.37
Col6a3E9PWQ3 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC6.46□□□□□ -1.37
Col6a3E9PWQ3 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
Col6a3E9PWQ3 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Col6a3E9PWQ3 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
Col6a3E9PWQ3 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
Col6a3E9PWQ3 Olfr1509-202ENSMUST00000205900 2444 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.37
Col6a3E9PWQ3 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC6.46□□□□□ -1.37
Col6a3E9PWQ3 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.37
Col6a3E9PWQ3 Wnk1-218ENSMUST00000161512 1426 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms