Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Cdx1P18111 Gm43422-201ENSMUST00000199780 3571 ntBASIC5.6□□□□□ -1.51
Cdx1P18111 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cdx1P18111 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Cdx1P18111 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
Cdx1P18111 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Cdx1P18111 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Cdx1P18111 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Cdx1P18111 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC5.6□□□□□ -1.51
Cdx1P18111 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cdx1P18111 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC5.6□□□□□ -1.51
Cdx1P18111 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Cdx1P18111 CT573019.1-201ENSMUST00000227762 1689 ntBASIC5.59□□□□□ -1.51
Cdx1P18111 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Cdx1P18111 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Cdx1P18111 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cdx1P18111 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Cdx1P18111 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Cdx1P18111 Gm7978-201ENSMUST00000178552 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cdx1P18111 Frmd7-201ENSMUST00000060650 2112 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Cdx1P18111 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Cdx1P18111 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cdx1P18111 Gm20789-201ENSMUST00000221002 4195 ntBASIC5.59□□□□□ -1.51
Cdx1P18111 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Cdx1P18111 Phf11a-201ENSMUST00000062307 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cdx1P18111 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Cdx1P18111 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cdx1P18111 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Cdx1P18111 Stmn1-203ENSMUST00000105868 967 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cdx1P18111 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cdx1P18111 Rpl35a-202ENSMUST00000115075 518 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cdx1P18111 Gm14745-201ENSMUST00000118480 1096 ntBASIC5.59□□□□□ -1.51
Cdx1P18111 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC5.59□□□□□ -1.51
Cdx1P18111 Gm7571-201ENSMUST00000120252 927 ntBASIC5.59□□□□□ -1.51
Cdx1P18111 Gm14826-201ENSMUST00000121284 901 ntBASIC5.59□□□□□ -1.51
Cdx1P18111 Gm12920-201ENSMUST00000121818 1186 ntBASIC5.59□□□□□ -1.51
Cdx1P18111 Gm22025-201ENSMUST00000122734 302 ntBASIC5.59□□□□□ -1.51
Cdx1P18111 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Cdx1P18111 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC5.59□□□□□ -1.51
Cdx1P18111 Gm14764-201ENSMUST00000147130 313 ntTSL 5 BASIC5.59□□□□□ -1.51
Cdx1P18111 Gpx2-ps1-201ENSMUST00000160622 571 ntBASIC5.59□□□□□ -1.51
Cdx1P18111 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Cdx1P18111 Gm5698-201ENSMUST00000178317 724 ntBASIC5.59□□□□□ -1.51
Cdx1P18111 Gm26671-201ENSMUST00000180423 1157 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Cdx1P18111 Mir6340-201ENSMUST00000183857 119 ntBASIC5.59□□□□□ -1.51
Cdx1P18111 Gm27204-201ENSMUST00000184673 527 ntTSL 2 BASIC5.59□□□□□ -1.51
Cdx1P18111 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cdx1P18111 Gm43655-201ENSMUST00000197367 222 ntBASIC5.59□□□□□ -1.51
Cdx1P18111 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC5.59□□□□□ -1.51
Cdx1P18111 Olfr1389-201ENSMUST00000203369 1073 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Cdx1P18111 Gm8921-201ENSMUST00000204306 649 ntBASIC5.59□□□□□ -1.51
Cdx1P18111 Gm44147-201ENSMUST00000204658 94 ntBASIC5.59□□□□□ -1.51
Cdx1P18111 Gm44577-201ENSMUST00000207413 1284 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Cdx1P18111 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC5.59□□□□□ -1.51
Cdx1P18111 Pln-203ENSMUST00000218468 760 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Cdx1P18111 Gm9231-201ENSMUST00000220817 1009 ntBASIC5.59□□□□□ -1.51
Cdx1P18111 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC5.59□□□□□ -1.51
Cdx1P18111 AL591207.2-201ENSMUST00000222991 337 ntBASIC5.59□□□□□ -1.51
Cdx1P18111 AC133598.2-201ENSMUST00000224302 624 ntBASIC5.59□□□□□ -1.51
Cdx1P18111 AC154755.1-201ENSMUST00000225244 537 ntBASIC5.59□□□□□ -1.51
Cdx1P18111 AC154361.1-201ENSMUST00000225694 745 ntBASIC5.59□□□□□ -1.51
Cdx1P18111 Cthrc1-204ENSMUST00000226433 596 ntBASIC5.59□□□□□ -1.51
Cdx1P18111 Alox5ap-201ENSMUST00000071130 1251 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cdx1P18111 Cldn10-202ENSMUST00000071546 1031 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Cdx1P18111 Olfr1113-201ENSMUST00000079966 981 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Cdx1P18111 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Cdx1P18111 Gm37953-201ENSMUST00000195293 1884 ntBASIC5.59□□□□□ -1.51
Cdx1P18111 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cdx1P18111 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Cdx1P18111 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Cdx1P18111 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
Cdx1P18111 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Cdx1P18111 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Cdx1P18111 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Cdx1P18111 Rps15a-204ENSMUST00000131374 5179 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Cdx1P18111 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Cdx1P18111 Gm4994-201ENSMUST00000118379 2187 ntBASIC5.59□□□□□ -1.52
Cdx1P18111 Zfp207-202ENSMUST00000053740 1562 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.52
Cdx1P18111 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Cdx1P18111 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Cdx1P18111 Crbn-202ENSMUST00000113239 2084 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.52
Cdx1P18111 AC159006.2-201ENSMUST00000228734 4144 ntBASIC5.59□□□□□ -1.52
Cdx1P18111 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
Cdx1P18111 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Cdx1P18111 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC5.58□□□□□ -1.52
Cdx1P18111 Gm43386-201ENSMUST00000199654 4001 ntBASIC5.58□□□□□ -1.52
Cdx1P18111 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Cdx1P18111 Gm14367-201ENSMUST00000119214 1497 ntBASIC5.58□□□□□ -1.52
Cdx1P18111 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Cdx1P18111 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Cdx1P18111 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Cdx1P18111 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Cdx1P18111 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Cdx1P18111 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Cdx1P18111 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Cdx1P18111 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Cdx1P18111 Gm37435-201ENSMUST00000192078 3947 ntBASIC5.58□□□□□ -1.52
Cdx1P18111 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Cdx1P18111 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Cdx1P18111 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms