Protein–RNA interactions for Protein: Q9JIH2

Nup50, Nuclear pore complex protein Nup50, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50Q9JIH2 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nup50Q9JIH2 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nup50Q9JIH2 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nup50Q9JIH2 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nup50Q9JIH2 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Nup50Q9JIH2 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nup50Q9JIH2 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.3■□□□□ 0.68
Nup50Q9JIH2 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.3■□□□□ 0.68
Nup50Q9JIH2 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nup50Q9JIH2 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nup50Q9JIH2 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nup50Q9JIH2 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nup50Q9JIH2 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nup50Q9JIH2 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nup50Q9JIH2 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nup50Q9JIH2 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Nup50Q9JIH2 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nup50Q9JIH2 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
Nup50Q9JIH2 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.29■□□□□ 0.68
Nup50Q9JIH2 Gm10033-202ENSMUST00000211874 928 ntBASIC19.29■□□□□ 0.68
Nup50Q9JIH2 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nup50Q9JIH2 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nup50Q9JIH2 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nup50Q9JIH2 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.28■□□□□ 0.68
Nup50Q9JIH2 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nup50Q9JIH2 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.28■□□□□ 0.68
Nup50Q9JIH2 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nup50Q9JIH2 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nup50Q9JIH2 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nup50Q9JIH2 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Nup50Q9JIH2 Gm6420-201ENSMUST00000193885 723 ntBASIC19.28■□□□□ 0.68
Nup50Q9JIH2 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nup50Q9JIH2 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nup50Q9JIH2 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nup50Q9JIH2 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nup50Q9JIH2 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nup50Q9JIH2 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Nup50Q9JIH2 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.28■□□□□ 0.68
Nup50Q9JIH2 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nup50Q9JIH2 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nup50Q9JIH2 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nup50Q9JIH2 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nup50Q9JIH2 Gm22325-201ENSMUST00000158904 308 ntBASIC19.27■□□□□ 0.68
Nup50Q9JIH2 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.27■□□□□ 0.68
Nup50Q9JIH2 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nup50Q9JIH2 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Nup50Q9JIH2 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nup50Q9JIH2 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nup50Q9JIH2 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.26■□□□□ 0.67
Nup50Q9JIH2 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Nup50Q9JIH2 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nup50Q9JIH2 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nup50Q9JIH2 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nup50Q9JIH2 Nespas-201ENSMUST00000143738 1083 ntBASIC19.26■□□□□ 0.67
Nup50Q9JIH2 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Nup50Q9JIH2 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
Nup50Q9JIH2 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Nup50Q9JIH2 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nup50Q9JIH2 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nup50Q9JIH2 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nup50Q9JIH2 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.25■□□□□ 0.67
Nup50Q9JIH2 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nup50Q9JIH2 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nup50Q9JIH2 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nup50Q9JIH2 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.25■□□□□ 0.67
Nup50Q9JIH2 Gm42778-201ENSMUST00000199644 553 ntBASIC19.25■□□□□ 0.67
Nup50Q9JIH2 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nup50Q9JIH2 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Nup50Q9JIH2 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Nup50Q9JIH2 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Nup50Q9JIH2 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nup50Q9JIH2 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.24■□□□□ 0.67
Nup50Q9JIH2 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nup50Q9JIH2 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nup50Q9JIH2 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nup50Q9JIH2 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nup50Q9JIH2 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.24■□□□□ 0.67
Nup50Q9JIH2 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Nup50Q9JIH2 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nup50Q9JIH2 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nup50Q9JIH2 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nup50Q9JIH2 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nup50Q9JIH2 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nup50Q9JIH2 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nup50Q9JIH2 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nup50Q9JIH2 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Nup50Q9JIH2 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nup50Q9JIH2 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nup50Q9JIH2 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nup50Q9JIH2 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nup50Q9JIH2 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nup50Q9JIH2 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.22■□□□□ 0.67
Nup50Q9JIH2 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nup50Q9JIH2 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nup50Q9JIH2 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.22■□□□□ 0.67
Nup50Q9JIH2 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nup50Q9JIH2 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nup50Q9JIH2 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nup50Q9JIH2 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Nup50Q9JIH2 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms