Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Gm9885-202ENSMUST00000186234 2209 ntBASIC15.78■□□□□ 0.12
Ssmem1Q9D9Y8 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ssmem1Q9D9Y8 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.78■□□□□ 0.12
Ssmem1Q9D9Y8 Gm2559-201ENSMUST00000201323 363 ntBASIC15.78■□□□□ 0.12
Ssmem1Q9D9Y8 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC15.78■□□□□ 0.12
Ssmem1Q9D9Y8 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ssmem1Q9D9Y8 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ssmem1Q9D9Y8 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ssmem1Q9D9Y8 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ssmem1Q9D9Y8 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ssmem1Q9D9Y8 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ssmem1Q9D9Y8 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ssmem1Q9D9Y8 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Ssmem1Q9D9Y8 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ssmem1Q9D9Y8 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ssmem1Q9D9Y8 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ssmem1Q9D9Y8 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ssmem1Q9D9Y8 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Ssmem1Q9D9Y8 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ssmem1Q9D9Y8 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Ssmem1Q9D9Y8 Golph3-205ENSMUST00000228671 2842 ntBASIC15.77■□□□□ 0.12
Ssmem1Q9D9Y8 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.77■□□□□ 0.12
Ssmem1Q9D9Y8 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ssmem1Q9D9Y8 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ssmem1Q9D9Y8 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ssmem1Q9D9Y8 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
Ssmem1Q9D9Y8 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ssmem1Q9D9Y8 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ssmem1Q9D9Y8 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ssmem1Q9D9Y8 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC15.77■□□□□ 0.11
Ssmem1Q9D9Y8 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ssmem1Q9D9Y8 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ssmem1Q9D9Y8 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ssmem1Q9D9Y8 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Ssmem1Q9D9Y8 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15.76■□□□□ 0.11
Ssmem1Q9D9Y8 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ssmem1Q9D9Y8 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Ssmem1Q9D9Y8 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Ssmem1Q9D9Y8 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ssmem1Q9D9Y8 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ssmem1Q9D9Y8 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.76■□□□□ 0.11
Ssmem1Q9D9Y8 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ssmem1Q9D9Y8 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ssmem1Q9D9Y8 Gm12527-201ENSMUST00000117967 564 ntBASIC15.76■□□□□ 0.11
Ssmem1Q9D9Y8 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ssmem1Q9D9Y8 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ssmem1Q9D9Y8 AC107452.1-201ENSMUST00000227963 481 ntBASIC15.76■□□□□ 0.11
Ssmem1Q9D9Y8 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ssmem1Q9D9Y8 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ssmem1Q9D9Y8 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Ssmem1Q9D9Y8 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ssmem1Q9D9Y8 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.76■□□□□ 0.11
Ssmem1Q9D9Y8 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ssmem1Q9D9Y8 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ssmem1Q9D9Y8 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ssmem1Q9D9Y8 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ssmem1Q9D9Y8 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.75■□□□□ 0.11
Ssmem1Q9D9Y8 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ssmem1Q9D9Y8 Gm2399-201ENSMUST00000104944 225 ntBASIC15.75■□□□□ 0.11
Ssmem1Q9D9Y8 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC15.75■□□□□ 0.11
Ssmem1Q9D9Y8 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC15.75■□□□□ 0.11
Ssmem1Q9D9Y8 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC15.75■□□□□ 0.11
Ssmem1Q9D9Y8 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC15.75■□□□□ 0.11
Ssmem1Q9D9Y8 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ssmem1Q9D9Y8 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Ssmem1Q9D9Y8 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Ssmem1Q9D9Y8 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ssmem1Q9D9Y8 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ssmem1Q9D9Y8 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ssmem1Q9D9Y8 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ssmem1Q9D9Y8 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ssmem1Q9D9Y8 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Ssmem1Q9D9Y8 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ssmem1Q9D9Y8 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Ssmem1Q9D9Y8 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
Ssmem1Q9D9Y8 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.74■□□□□ 0.11
Ssmem1Q9D9Y8 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ssmem1Q9D9Y8 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ssmem1Q9D9Y8 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ssmem1Q9D9Y8 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ssmem1Q9D9Y8 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Ssmem1Q9D9Y8 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ssmem1Q9D9Y8 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ssmem1Q9D9Y8 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ssmem1Q9D9Y8 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ssmem1Q9D9Y8 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ssmem1Q9D9Y8 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC15.73■□□□□ 0.11
Ssmem1Q9D9Y8 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ssmem1Q9D9Y8 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ssmem1Q9D9Y8 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ssmem1Q9D9Y8 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ssmem1Q9D9Y8 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC15.73■□□□□ 0.11
Ssmem1Q9D9Y8 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.73■□□□□ 0.11
Ssmem1Q9D9Y8 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Ssmem1Q9D9Y8 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.73■□□□□ 0.11
Ssmem1Q9D9Y8 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ssmem1Q9D9Y8 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ssmem1Q9D9Y8 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ssmem1Q9D9Y8 Gm12896-201ENSMUST00000118430 226 ntBASIC15.73■□□□□ 0.11
Ssmem1Q9D9Y8 Gm20760-201ENSMUST00000179197 648 ntBASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms