Protein–RNA interactions for Protein: Q9D7V1

Sh2d4a, SH2 domain-containing protein 4A, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4aQ9D7V1 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.69■□□□□ 0.42
Sh2d4aQ9D7V1 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh2d4aQ9D7V1 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.69■□□□□ 0.42
Sh2d4aQ9D7V1 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Sh2d4aQ9D7V1 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Sh2d4aQ9D7V1 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh2d4aQ9D7V1 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh2d4aQ9D7V1 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.69■□□□□ 0.42
Sh2d4aQ9D7V1 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh2d4aQ9D7V1 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh2d4aQ9D7V1 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh2d4aQ9D7V1 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh2d4aQ9D7V1 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh2d4aQ9D7V1 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sh2d4aQ9D7V1 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sh2d4aQ9D7V1 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh2d4aQ9D7V1 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh2d4aQ9D7V1 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh2d4aQ9D7V1 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Sh2d4aQ9D7V1 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh2d4aQ9D7V1 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Sh2d4aQ9D7V1 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Sh2d4aQ9D7V1 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh2d4aQ9D7V1 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh2d4aQ9D7V1 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sh2d4aQ9D7V1 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Sh2d4aQ9D7V1 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sh2d4aQ9D7V1 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.68■□□□□ 0.42
Sh2d4aQ9D7V1 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sh2d4aQ9D7V1 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.68■□□□□ 0.42
Sh2d4aQ9D7V1 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sh2d4aQ9D7V1 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sh2d4aQ9D7V1 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.67■□□□□ 0.42
Sh2d4aQ9D7V1 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh2d4aQ9D7V1 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sh2d4aQ9D7V1 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh2d4aQ9D7V1 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Sh2d4aQ9D7V1 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh2d4aQ9D7V1 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sh2d4aQ9D7V1 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sh2d4aQ9D7V1 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh2d4aQ9D7V1 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh2d4aQ9D7V1 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Sh2d4aQ9D7V1 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh2d4aQ9D7V1 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sh2d4aQ9D7V1 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh2d4aQ9D7V1 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh2d4aQ9D7V1 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh2d4aQ9D7V1 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.66■□□□□ 0.42
Sh2d4aQ9D7V1 Gm8493-201ENSMUST00000196881 489 ntBASIC17.66■□□□□ 0.42
Sh2d4aQ9D7V1 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh2d4aQ9D7V1 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh2d4aQ9D7V1 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh2d4aQ9D7V1 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Sh2d4aQ9D7V1 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Sh2d4aQ9D7V1 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh2d4aQ9D7V1 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh2d4aQ9D7V1 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Sh2d4aQ9D7V1 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Sh2d4aQ9D7V1 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sh2d4aQ9D7V1 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.66■□□□□ 0.42
Sh2d4aQ9D7V1 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh2d4aQ9D7V1 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh2d4aQ9D7V1 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh2d4aQ9D7V1 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh2d4aQ9D7V1 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh2d4aQ9D7V1 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.65■□□□□ 0.42
Sh2d4aQ9D7V1 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh2d4aQ9D7V1 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh2d4aQ9D7V1 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh2d4aQ9D7V1 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh2d4aQ9D7V1 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh2d4aQ9D7V1 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh2d4aQ9D7V1 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh2d4aQ9D7V1 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sh2d4aQ9D7V1 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Sh2d4aQ9D7V1 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Sh2d4aQ9D7V1 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Sh2d4aQ9D7V1 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Sh2d4aQ9D7V1 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.64■□□□□ 0.41
Sh2d4aQ9D7V1 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Sh2d4aQ9D7V1 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.64■□□□□ 0.41
Sh2d4aQ9D7V1 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh2d4aQ9D7V1 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sh2d4aQ9D7V1 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh2d4aQ9D7V1 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.64■□□□□ 0.41
Sh2d4aQ9D7V1 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh2d4aQ9D7V1 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh2d4aQ9D7V1 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.63■□□□□ 0.41
Sh2d4aQ9D7V1 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sh2d4aQ9D7V1 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.63■□□□□ 0.41
Sh2d4aQ9D7V1 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Sh2d4aQ9D7V1 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sh2d4aQ9D7V1 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh2d4aQ9D7V1 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.63■□□□□ 0.41
Sh2d4aQ9D7V1 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh2d4aQ9D7V1 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh2d4aQ9D7V1 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh2d4aQ9D7V1 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sh2d4aQ9D7V1 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms