Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim42Q9D2H5 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Trim42Q9D2H5 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim42Q9D2H5 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim42Q9D2H5 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.21■□□□□ 0.51
Trim42Q9D2H5 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Trim42Q9D2H5 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim42Q9D2H5 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim42Q9D2H5 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Trim42Q9D2H5 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Trim42Q9D2H5 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim42Q9D2H5 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Trim42Q9D2H5 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim42Q9D2H5 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim42Q9D2H5 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim42Q9D2H5 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim42Q9D2H5 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.2■□□□□ 0.5
Trim42Q9D2H5 Gm9959-201ENSMUST00000068277 390 ntBASIC18.2■□□□□ 0.5
Trim42Q9D2H5 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Trim42Q9D2H5 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.2■□□□□ 0.5
Trim42Q9D2H5 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.2■□□□□ 0.5
Trim42Q9D2H5 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim42Q9D2H5 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim42Q9D2H5 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim42Q9D2H5 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.19■□□□□ 0.5
Trim42Q9D2H5 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Trim42Q9D2H5 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
Trim42Q9D2H5 Rps24-207ENSMUST00000224568 714 ntBASIC18.19■□□□□ 0.5
Trim42Q9D2H5 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim42Q9D2H5 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Trim42Q9D2H5 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim42Q9D2H5 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim42Q9D2H5 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim42Q9D2H5 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Trim42Q9D2H5 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim42Q9D2H5 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim42Q9D2H5 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim42Q9D2H5 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim42Q9D2H5 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trim42Q9D2H5 Gm45102-201ENSMUST00000207427 857 ntBASIC18.18■□□□□ 0.5
Trim42Q9D2H5 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim42Q9D2H5 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim42Q9D2H5 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Trim42Q9D2H5 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim42Q9D2H5 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trim42Q9D2H5 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim42Q9D2H5 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trim42Q9D2H5 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Trim42Q9D2H5 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim42Q9D2H5 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim42Q9D2H5 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim42Q9D2H5 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.17■□□□□ 0.5
Trim42Q9D2H5 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim42Q9D2H5 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim42Q9D2H5 Gm37812-201ENSMUST00000195216 2475 ntBASIC18.17■□□□□ 0.5
Trim42Q9D2H5 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim42Q9D2H5 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim42Q9D2H5 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim42Q9D2H5 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trim42Q9D2H5 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim42Q9D2H5 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim42Q9D2H5 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Trim42Q9D2H5 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC18.16■□□□□ 0.5
Trim42Q9D2H5 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Trim42Q9D2H5 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim42Q9D2H5 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim42Q9D2H5 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim42Q9D2H5 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim42Q9D2H5 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim42Q9D2H5 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim42Q9D2H5 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.16■□□□□ 0.5
Trim42Q9D2H5 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim42Q9D2H5 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim42Q9D2H5 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim42Q9D2H5 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Trim42Q9D2H5 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim42Q9D2H5 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim42Q9D2H5 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim42Q9D2H5 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Trim42Q9D2H5 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim42Q9D2H5 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim42Q9D2H5 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim42Q9D2H5 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim42Q9D2H5 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Trim42Q9D2H5 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim42Q9D2H5 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim42Q9D2H5 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim42Q9D2H5 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim42Q9D2H5 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim42Q9D2H5 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim42Q9D2H5 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Trim42Q9D2H5 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.15■□□□□ 0.5
Trim42Q9D2H5 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim42Q9D2H5 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim42Q9D2H5 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim42Q9D2H5 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim42Q9D2H5 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Trim42Q9D2H5 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Trim42Q9D2H5 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim42Q9D2H5 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms